Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Vra7g3183 | ATGTGGAGGAACCTCATCTCACAAGCATTATATCAAGTGCTTGTGTTACTGATTTTGCAATTCAAGGGAAGATCAATCTTTGATGTGAGTGAGAAGGTGAAGAACACTATTAGTTTCAACAATTTTGTCCTCTGCCAGGTTTTCAATGAGTTCAATGCAAGGAAGCTGGAGAAAAAGAACATCTTTGAAGAGCTTGGTAAAAACAAGCTGTTCATAGTAATTGTGGGCCTGACTGTGGTTCTTCAGGTTGTGTTGGTTGAGTTTCTGAAGATGTTTGCTGACACTGAGAGATTGAGTTGGGGCCAATGGGGTGTTTGTGTTGCTATTGGAGATTTGTCTTGGCCAATTGGCCTGCTTGTGAAGTGTATCTCTGTCGGTCCCAACAAATAG | 390 | 0.4154 | MWRNLISQALYQVLVLLILQFKGRSIFDVSEKVKNTISFNNFVLCQVFNEFNARKLEKKNIFEELGKNKLFIVIVGLTVVLQVVLVEFLKMFADTERLSWGQWGVCVAIGDLSWPIGLLVKCISVGPNK* | 130 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Vra7g3183 | 129 | PANTHER | CATION TRANSPORTING ATPASE | 1 | 125 | - | - | |
| Vra7g3183 | 129 | PANTHER | CALCIUM-TRANSPORTING ATPASE | 1 | 125 | - | - | |
| Vra7g3183 | 129 | SUPERFAMILY | Calcium ATPase, transmembrane domain M | 1 | 123 | IPR023298 | - | |
| Vra7g3183 | 129 | Pfam | Cation transporting ATPase, C-terminus | 1 | 122 | IPR006068 | - | |
| Vra7g3183 | 129 | Gene3D | - | 19 | 126 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Vra7g3183 | Vra-Chr7 | 51519159 | 51520095 | Proximal |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Vra7g3183 | 1 | 125 | Primary Pumps ATPases | AT3G63380 | 64.800 | 1.48e-53 | 178 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Vra7g3183 | K01537 | - | vra:106766591 | 251.521 |