Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vra7g3181 | ATGGCAGACGTTGAGGTCGATGTCGCGGCAGCGGGGCAGCCCAAGAAGAGAACATTCAAGAAGTTCAGTTTCAGAGGCGTGGATCTCGATGCTCTTCTTGATATGTCCACAGATGAACTTGTCAAGCTTTTCAGTGCTCGCGCTCGTAGAAGGTTCCAGAGAGGTCTAACCAGAAAGCCCATGGCCTTGATCAAGAAGCTTCGCAAAGCGAAAAGGGAAGCTCCAGCAGGTGAGAAGCCAGAACCAGTGCGCACCCACCTCCGCAACATGATCATTGTTCCTGAGATGATTGGTAGCATCATAGGAGTATACAATGGCAAGACCTTTAACCAGGTTGAAATCAAACCTGAGATGATCGGGCATTATTTAGCCGAGTTTTCTATCTCATACAAGCCCGTTAAGCACGGGAGACCTGGTATTGGTGCTACTCACTCATCCAGGTTTATTCCTCTCAAGTGA | 459 | 0.488 | MADVEVDVAAAGQPKKRTFKKFSFRGVDLDALLDMSTDELVKLFSARARRRFQRGLTRKPMALIKKLRKAKREAPAGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK* | 153 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vra7g3181 | 152 | PIRSF | RPS19p_RPS19a_RPS15e_RPS19o | 7 | 152 | IPR002222 | GO:0003735|GO:0005840|GO:0006412 | |
Vra7g3181 | 152 | TIGRFAM | uS19_arch: ribosomal protein uS19 | 19 | 152 | IPR005713 | GO:0003735|GO:0006412|GO:0015935 | |
Vra7g3181 | 152 | PRINTS | Ribosomal protein S19 family signature | 85 | 104 | IPR002222 | GO:0003735|GO:0005840|GO:0006412 | |
Vra7g3181 | 152 | PRINTS | Ribosomal protein S19 family signature | 105 | 117 | IPR002222 | GO:0003735|GO:0005840|GO:0006412 | |
Vra7g3181 | 152 | PRINTS | Ribosomal protein S19 family signature | 117 | 132 | IPR002222 | GO:0003735|GO:0005840|GO:0006412 | |
Vra7g3181 | 152 | PANTHER | LOW QUALITY PROTEIN: 40S RIBOSOMAL PROTEIN S15 | 2 | 152 | - | - | |
Vra7g3181 | 152 | ProSitePatterns | Ribosomal protein S19 signature. | 105 | 129 | IPR020934 | GO:0003723 | |
Vra7g3181 | 152 | Gene3D | 30s Ribosomal Protein S19; Chain A | 8 | 152 | IPR023575 | GO:0003735|GO:0005840|GO:0006412 | |
Vra7g3181 | 152 | Pfam | Ribosomal protein S19 | 50 | 135 | IPR002222 | GO:0003735|GO:0005840|GO:0006412 | |
Vra7g3181 | 152 | PANTHER | RIBOSOMAL PROTEIN S19P FAMILY MEMBER | 2 | 152 | IPR002222 | GO:0003735|GO:0005840|GO:0006412 | |
Vra7g3181 | 152 | Hamap | 30S ribosomal protein S19 [rpsS]. | 48 | 141 | IPR002222 | GO:0003735|GO:0005840|GO:0006412 | |
Vra7g3181 | 152 | SUPERFAMILY | Ribosomal protein S19 | 55 | 136 | IPR023575 | GO:0003735|GO:0005840|GO:0006412 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Vra7g3181 | Vra-Chr7 | 51502186 | 51504001 | Dispersed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Vra7g3181 | 1 | 152 | Cytoplasmic Ribosomal Protein Gene Family | AT5G09500 | 89.474 | 7.93e-95 | 269 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vra7g3181 | K02958 | - | gmx:100801408 | 295.049 |