Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g3134 ATGTATGCTTCAATCCCTCTCCTCCTTTTCACCTTCTTAATTTCATCCATTCTCTCCTTCATCTTCCTGCGTCGAAACCACACCCAAGATCACCGGAGACACCCGCCGGGCCCACCACCATTCCCGATCATCGGTAACCTCCACATGCTGGGGAAGCTCCCGCACCGCACGCTCCATGCCCTGGCCCAACAATACGGGCCCATCATGTCCCTGCGCCTGGGTCAGGTCCCAACCGTCATCGTCTCCTCCTCCGAGTCCGCCCAACACTTCCTCAAATCACACGACGTCGTTTTCGCTAGCCGTCCAATACTCGAAGCGTCCAAGTACTTCGGCTACGGCTCCAAGGGACTAGTGTTCTCGGAGTACGGCCCGTACTGGCGGCAAATGAGGAAAGTGTGCACGCTCCAACTTCTGAGCGCGTCGAAGGTTGAGTCCTTCGCGCCGCTGAGGAAGCGGGAGCTGGAGCTGGCAGTGAAGTCGGTGCAGGAGCGCGCCGCAAGAGGGGAGGTGTTGGACCTTAGCATGGTGGTGCACGACGTTGTGGAAGATATCGTGTACAAAATGGTGCTGGGATGTAGCAAGCACGATGAGTTTGATTTGAAGGGGTTGATTCAGAACGGGATGAACATCACGGGTGCGTTTAATTTAGCGGATTATGTGCCTTGGCTTGGTTCTTTGGATCTTCAGGGATTGAATCGAAGTTATAAGAAAATTAGTACAGCACTTGACCAAGTGTTGGAAAAGATAATAAAGGAGCATGAAGACGGTTCAAATGCACAAAATGAGCAGCAGCATAAGGACTTCGTAGGCATATTACTCTCGCTGATGTACCAACCCATGGATCCTCATGATGAACAAAGCCATGTCATTGATCGAACTAACATCAAGGCTATACTTTTAGATATGATTTCTGGGTCATTTGAAACTTCTGCAACTGTGGTGGAGTGGACGCTATCCGAACTCCTAAGGCATCCAAGAGTGATGAAAAAGCTTCAAGATGAGCTAGATAATGTGATTGGGAGGAACAAATTAGTGGAGGAAAATGATTTGGTGAAGTTAAATTACTTGGATATTGTGATCAAGGAGACATTGAGATTATATCCTCCTGGACCATTAGTTCCCCGAGAGTCAACAGAGGATGCTATAGTTCAGGGTTATTTCTTAAAGAAAAAATCAAGAATCATAATAAACTTATGGGCCATGGGAAGAGATTCTAAGATATGGTCTGATAATGCTGAAGTATTTTATCCAGAGAGATTCATCGATAACAATTTAGACTACAGAGGATATGACTTTAAATATATGCCATTTGGTTTTGGTCGAAGGGGCTGCCCAGGAATAAACCTGGGCTTAGCAACAGTTAAACTTGTTGTGGCTCAATTAGTACATTGTTTTAGTTGGGAACTTCCAGAAGGTATGACCTCGGATGAGTTGGATATGAATGAGAAATTTGGCCTCTCAATACCAAGAGTCAAGCACTTGTTTGCTGTACCCAGGAATCGTTTTCACAGGGAATTTTGCAAAGAATAA 1530 0.4641 MYASIPLLLFTFLISSILSFIFLRRNHTQDHRRHPPGPPPFPIIGNLHMLGKLPHRTLHALAQQYGPIMSLRLGQVPTVIVSSSESAQHFLKSHDVVFASRPILEASKYFGYGSKGLVFSEYGPYWRQMRKVCTLQLLSASKVESFAPLRKRELELAVKSVQERAARGEVLDLSMVVHDVVEDIVYKMVLGCSKHDEFDLKGLIQNGMNITGAFNLADYVPWLGSLDLQGLNRSYKKISTALDQVLEKIIKEHEDGSNAQNEQQHKDFVGILLSLMYQPMDPHDEQSHVIDRTNIKAILLDMISGSFETSATVVEWTLSELLRHPRVMKKLQDELDNVIGRNKLVEENDLVKLNYLDIVIKETLRLYPPGPLVPRESTEDAIVQGYFLKKKSRIIINLWAMGRDSKIWSDNAEVFYPERFIDNNLDYRGYDFKYMPFGFGRRGCPGINLGLATVKLVVAQLVHCFSWELPEGMTSDELDMNEKFGLSIPRVKHLFAVPRNRFHREFCKE* 510
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g3134 509 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 437 446 IPR017972 GO:0005506|GO:0016705
Vra7g3134 509 PRINTS E-class P450 group I signature 62 81 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra7g3134 509 PRINTS E-class P450 group I signature 86 107 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra7g3134 509 PRINTS E-class P450 group I signature 294 311 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra7g3134 509 PRINTS E-class P450 group I signature 314 340 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra7g3134 509 PRINTS E-class P450 group I signature 357 375 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra7g3134 509 PRINTS E-class P450 group I signature 434 444 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra7g3134 509 PRINTS E-class P450 group I signature 444 467 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra7g3134 509 SUPERFAMILY Cytochrome P450 29 501 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra7g3134 509 PRINTS P450 superfamily signature 305 322 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra7g3134 509 PRINTS P450 superfamily signature 358 369 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra7g3134 509 PRINTS P450 superfamily signature 435 444 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra7g3134 509 Gene3D Cytochrome P450 20 502 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra7g3134 509 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 11 502 - -
Vra7g3134 509 PANTHER CYTOCHROME P450 FAMILY PROTEIN 11 502 - -
Vra7g3134 509 Coils Coil 328 348 - -
Vra7g3134 509 Pfam Cytochrome P450 35 494 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra7g3134 Vra-Chr7 51136863 51139208 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra7g3134 35 497 Cytochrome P450 AT3G48310 39.140 1.49e-123 369
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra7g3134 - - gmx:100814172 775.393
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra7g3134 7 51136863 51139208 Vra7g3134 7 51136863 51139208 ECH
Vra7g3134 7 51136863 51139208 Vra1g0580 1 6825340 6827336 PCT