Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g3130 ATGTATGGCGGTGACGAAGTATCAGCCATAGTAATAGACCTNGGTTCGCATACATGCAAAGCCGGTTATGCTGGCGAAGATGCTCCCAAGGNCGTTTTCCCCTCTGTTGTTGGTGCAATTGATCAAATGGACATTGATGGACCTGTTCATGCTGGAGTGTCATCTGGATCTGCTGTGGATTTACAGAACAATAAAAAAAATCATGAATCTGACAGAACCAAGGAAAAATGCAAACTTTATATAGGATCTCAGTCTTTGGGATACCGTCGAGACTATATGGAGCTGCTCTCACCATTGAAGAATGGAGTTATTGTTGACTGGAATATTGTTGACAACATATGGGATCATGCTTTGAGGGAATGCCTCTTAGTTGATCCTAAAGAGCGTCCAATGCTACTTGCCGAACAATGTTCCAACACTCAAGAACAGAGAGAAAGGGCAGCAGAACTTATGTTTGAAAAATATAAAGTACCAGCATTGTTTTTGGCGAAGAATGCGGTAAGTTGTTTGATTTATACTTCTCTGTTCTTTAGTACATTCTTTCTTCCATTGCTCATTGTTTTACCGTTTATTTTGCAGATCATAGAGAGCATTAATAAGTGTGATGTGGACATTCGTAGAGAACTATTTAGTACCATACTGCTTACTGGTGGTACAGCTTCGATGCAACAACTGAAGGAACGCATTGAGAAAGACTTGCTAGAGGAGTCCCCTCAAGCTGCTAGAGTTAAAGTATTTGCCAGTGGCAATGCTACTGAAAGAAGGTTCAGTGTTTGGATAGGGGGGAGTATATTGGCTTCTCTTGGCTCCTTCCAGCAGATGTGGTTCTCCAAGTCTGAGTATGAAGAGCAAGGGGCTTCTTATATCCAAAGAAAATGCCCCTGA 885 0.4169 MYGGDEVSAIVIDLGSHTCKAGYAGEDAPKXVFPSVVGAIDQMDIDGPVHAGVSSGSAVDLQNNKKNHESDRTKEKCKLYIGSQSLGYRRDYMELLSPLKNGVIVDWNIVDNIWDHALRECLLVDPKERPMLLAEQCSNTQEQRERAAELMFEKYKVPALFLAKNAVSCLIYTSLFFSTFFLPLLIVLPFILQIIESINKCDVDIRRELFSTILLTGGTASMQQLKERIEKDLLEESPQAARVKVFASGNATERRFSVWIGGSILASLGSFQQMWFSKSEYEEQGASYIQRKCP* 295
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g3130 294 SUPERFAMILY Actin-like ATPase domain 136 293 IPR043129 -
Vra7g3130 294 Gene3D - 189 252 - -
Vra7g3130 294 Gene3D - 253 294 - -
Vra7g3130 294 Pfam Actin 4 168 IPR004000 -
Vra7g3130 294 Pfam Actin 194 293 IPR004000 -
Vra7g3130 294 PANTHER ACTIN 2 172 IPR004000 -
Vra7g3130 294 PANTHER ACTIN 193 293 IPR004000 -
Vra7g3130 294 Gene3D - 1 181 - -
Vra7g3130 294 SMART actin_3 7 294 IPR004000 -
Vra7g3130 294 PANTHER - 2 172 - -
Vra7g3130 294 PANTHER - 193 293 - -
Vra7g3130 294 SUPERFAMILY Actin-like ATPase domain 4 170 IPR043129 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra7g3130 Vra-Chr7 51097364 51104381 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra7g3130 180 293 Cytoskeleton Gene Families AT5G09810 47.863 7.86e-29 111
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra7g3130 K11340 - vra:106766581 561.222
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra7g3130 7 51097364 51104381 Vra7g3130 7 51097364 51104381 ECH