Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g3119 ATGAAGAAGAAACAAGGACACTCCTTTAATCTAAGACTCCTCCTCGTTGCCTTCTTTCTGGCCACATGTGCCAATGCCTCCCTTCTCACGCCAACCCAATCGCGCCATCTTCTGTACTACAGAGACGAGTTTGGAGATAGAGGAGAGAATGTCACCGTAGACCCTTCCCTTGCTTTCGAAAATGACCGTCTCAGAAACGCTTACATAGCTCTGCAAGCTTGGAAGCTCGCCATTTTATCTGATCCCCGCAACCAGACAACCGACTGGGTAGGATCCGATGTTTGTAGCTACACCGGTGTATACTGTGCACAAGCGCTCGACAACCCCTCCGTCCGTACAGTCGCCGGCATTGATCTCAACCATCAGGACATTGCCGGCTATTTACCGGAGGAGCTCGGTTTGCTAGTAGATCTTGCACTCTTTCACATCAACTCCAACAGATTCTGCGGCACTGTGCCCCACACGTTCCGGAAGTTGGTACTCCTCTACGAGCTGGATCTCAGTAACAACCGCTTTGCGGGGAGGTTCCCCGAGGTGGTCCTGCGCCTTCCTTCGCTCAAGTTCTTGGATCTTAGGTTCAACGAATTCGAAGGAGCTGTGCCCAGGGAATTGTTCGACAAAGATCTCGACGCCATTTTCATCAACGACAACCGTTTTGTCTTTGACCTTCCAGATAACTTCGGCAACTCCCCCGTCTCCGTCATCGTCCTCGCCAACAACAGATTCCACGGCTGCATTCCCCACAGCCTCGGCAACATGTCCAACCTCAATGAGATCATTCTCATGAACAACGCATTCCGATCCTGCTTGCCCTCCGAGATAGGCTTGTTGAAGAATCTCACGGTGTTCGACGTCAGCTTTAACCAACTTCTCGGCCCCTTACCAAGCGCCGTTGGAAATGCCGTCAGCTTGGAACAGCTCAACGTGGCCCACAACTTACTCTCCGGTCAAATTCCTCCCAGTATATGTATGTTGCCTCACCTTCTCAACTTCACTTACTCCTTTAACTTCTTCACCGGCGAACCTCCTGCCTGTCTCGCCTTGCCGGCGTTTGACGATAGGATCAACTGCTTGCCGGCGAGGCCCGTTCAGAGGCCTCCGGCGCAATGTCAGGCTTTCTTGTCTAAGCCTGTGGACTGTAACTCCTTTAACTGCAAGCCATTTGTTCCTTCACCTCTTTCCCCCACAACACCTGCAACTCCTTCACCACCATCTCCTGGGACACCGTCGTCTCCATCACCTGGGACACCTTCACCAGTAACTCCTTCGCCTCCATCACCTGGGACACCTTCGCCTGTAACTCCTTCACCACCATCTCCTGGGACAGCTTCACCTGTAACTCCTTCACCACCCTCTCCTGGGACACCTTCACCTTTAACTCCTTCGCCTCCATCACCTGGGACACCTTCACCTGGAACTCCTTCACCACCATCTCCTGGGACACCTTCACCAGGAACTCCTTCTCCTCCGTCACCTGGGACACCTTCACCTGTAACTCCTTCGCCTCCATCACCTGGGACACCTTCGCCTGTAACTCCTTCGCCTCTATCACCTGGGACACCTTCACCCGTAAGTCCTTCGCCGTTACCTTCACCTACAACACCTTCGCCTCCTTCGCCTGCCGCACCTTCCCCATTACCTTCACCTACGACACCTACGTCACCTACACCTCCTTCGGAACCACCGGTGGTGGGGCATTCCCCTCCACCCCGGTCAGTGGCACCTTCTCCACTACCACCCATTCACACTCCTCCTTCACCGGTGTATTTGCCACCACCACATTCTTCCCCTGCTCCACCTGGCTACTCTTCACAACCTCCTCCACCTTCGCAATTGCCCCCTCCATCATACACTCCGCCTTCTCCAGTGACACCTTTTCCTACTCCAACGCCACCCAATGGTGTCCACTCTCCGCCGCCACCGGCGCCTACATTCTCGACACCGCCACCTTCACATAATTATGGCTCATCGCCACCTCCTACACCTCATCCCTCACCATCACCTCGTCCTTACCCTTATTTATCACCCCCGCCACCTCCTTATCCTGTTCGTGTTCCACCTCCACCACCACCTTGTACAGAACTTCTTCCACCTCCTCCGCAATCAACACCTTCTCCCACACCTTACCTCCCACCACCATCCTCGTCTCACCCACCTTATCACCCATCACCATCCCCTTCTCACCCATCACCTTATCACCCGCCACCATCCCCTTCTCCATCTCCAACTCCTCCGGTTCAATACAGTTCGCCTCCCCCGCCGCCTCCTCCACCAGCAGTTTCTCCACCGCCACCTGTTGTATACCAAAACCCACCACCTGCCCCTGTATATGAAGGGCCATTGCCACCCATCGTGGGACTCCCATACGCATCGCCTCCGCCACCACCCTTTTATTGA 2397 0.5457 MKKKQGHSFNLRLLLVAFFLATCANASLLTPTQSRHLLYYRDEFGDRGENVTVDPSLAFENDRLRNAYIALQAWKLAILSDPRNQTTDWVGSDVCSYTGVYCAQALDNPSVRTVAGIDLNHQDIAGYLPEELGLLVDLALFHINSNRFCGTVPHTFRKLVLLYELDLSNNRFAGRFPEVVLRLPSLKFLDLRFNEFEGAVPRELFDKDLDAIFINDNRFVFDLPDNFGNSPVSVIVLANNRFHGCIPHSLGNMSNLNEIILMNNAFRSCLPSEIGLLKNLTVFDVSFNQLLGPLPSAVGNAVSLEQLNVAHNLLSGQIPPSICMLPHLLNFTYSFNFFTGEPPACLALPAFDDRINCLPARPVQRPPAQCQAFLSKPVDCNSFNCKPFVPSPLSPTTPATPSPPSPGTPSSPSPGTPSPVTPSPPSPGTPSPVTPSPPSPGTASPVTPSPPSPGTPSPLTPSPPSPGTPSPGTPSPPSPGTPSPGTPSPPSPGTPSPVTPSPPSPGTPSPVTPSPLSPGTPSPVSPSPLPSPTTPSPPSPAAPSPLPSPTTPTSPTPPSEPPVVGHSPPPRSVAPSPLPPIHTPPSPVYLPPPHSSPAPPGYSSQPPPPSQLPPPSYTPPSPVTPFPTPTPPNGVHSPPPPAPTFSTPPPSHNYGSSPPPTPHPSPSPRPYPYLSPPPPPYPVRVPPPPPPCTELLPPPPQSTPSPTPYLPPPSSSHPPYHPSPSPSHPSPYHPPPSPSPSPTPPVQYSSPPPPPPPPAVSPPPPVVYQNPPPAPVYEGPLPPIVGLPYASPPPPPFY* 799
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g3119 798 Gene3D Ribonuclease Inhibitor 67 352 IPR032675 -
Vra7g3119 798 Pfam Leucine rich repeat N-terminal domain 70 102 IPR013210 -
Vra7g3119 798 MobiDBLite consensus disorder prediction 392 798 - -
Vra7g3119 798 SUPERFAMILY L domain-like 77 349 - -
Vra7g3119 798 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 5 33 537 - -
Vra7g3119 798 PRINTS Proline rich extensin signature 383 404 - -
Vra7g3119 798 PRINTS Proline rich extensin signature 406 422 - -
Vra7g3119 798 PRINTS Proline rich extensin signature 427 444 - -
Vra7g3119 798 PRINTS Proline rich extensin signature 445 470 - -
Vra7g3119 798 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 33 537 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra7g3119 Vra-Chr7 50987007 50990066 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra7g3119 32 392 Leucine-rich Repeat extension Gene Families AT3G24480 75.691 0.0 597
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra7g3119 - - pvu:PHAVU_002G314200g 716.072
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra7g3119 7 50987007 50990066 Vra7g3119 7 50987007 50990066 ECH