Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g3118 ATGTTTGTATTATCACATTACAATTCTGTTTTGGTTAGCAAAAGTAGAAACAGAGTGATGTCAGGTCTTAGCAATGGCGACGCTGCCTCCGTCAAGAAGCTCCCGTCGGTCAAGTTCACCAAGCTTTTTATCAACGGAGAGTTTGTAGACTCGGTCTCAGGAAAGACATTCGAGAGCATAGATCCAAGAACTGGAGAGGTTATAGCAANTATCAGCGAAGGAGATAAAGAAGACATAGACATTGCTGTTAAAGCAGCACGTCACGCCTTTGACTTTGGTCCTTGGCCTCGCATGTCTGGCGCTGATAGAGCTAAAATACTGATGAAATGGGCGCAACTAATTGATGAACATGCAGAAGAACTTGCAACATTGGATGTCATTGATGCAGGAAAGTTGTATCACATGTGTAAGAATTTGGAAGTTCCATCGTCTGCAAACACTCTACGTTACTATGCAGGTGCTGCCGACAAGATTCGTGGAGAGGTCTTGAAAAGCTCTGGAAAGTTCCATGCGTACACATTTTTTGATCCTAAAGTCCAACAGGGACCACAGGTTGACAAGAAACAGTTTGAGAAGATTCTTTCATATATTGAGCATGGAAAGAGAGAAGGAGCGACCCTTTTAACCGGTGGTAAAACATTGGGCAATAAGGGCTACTTCATTGAGCCAACAATTTTCTCCGATATAAAGGACGATATGCTCATAGCACAAGATGAAATATTTGGCCCTGTGATGGCGTTGAAGAAGTTTAAGAGCATTGAAGAAGCAATTAAAAGTGCGAATAATAGTAAGTATGGCTTAGCAGCAGGCATAGTGACAAAGAATTTGGATACAGCAAATACTGTGTCAAGGTCGATTCGTGCAGGTACCATTTGGATCAATTGCTACTTTGCCATTGGTGATGATGTTCCCTTTGGAGGGTACAAGATGAGTGGATTTGGAAAAGAACATGGCTTGGAAGCCCTTCACAAATACATGCAAGTTAAATCTGTTGTAACTCCTCTTTACAATTCTCCTTGGCTTTGA 1026 0.4191 MFVLSHYNSVLVSKSRNRVMSGLSNGDAASVKKLPSVKFTKLFINGEFVDSVSGKTFESIDPRTGEVIAXISEGDKEDIDIAVKAARHAFDFGPWPRMSGADRAKILMKWAQLIDEHAEELATLDVIDAGKLYHMCKNLEVPSSANTLRYYAGAADKIRGEVLKSSGKFHAYTFFDPKVQQGPQVDKKQFEKILSYIEHGKREGATLLTGGKTLGNKGYFIEPTIFSDIKDDMLIAQDEIFGPVMALKKFKSIEEAIKSANNSKYGLAAGIVTKNLDTANTVSRSIRAGTIWINCYFAIGDDVPFGGYKMSGFGKEHGLEALHKYMQVKSVVTPLYNSPWL* 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g3118 341 SUPERFAMILY ALDH-like 34 177 IPR016161 GO:0016491
Vra7g3118 341 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 303 331 IPR016162 GO:0016491
Vra7g3118 341 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 32 175 IPR016162 GO:0016491
Vra7g3118 341 PANTHER ALDEHYDE DEHYDROGENASE-RELATED 175 341 - -
Vra7g3118 341 PANTHER ALDEHYDE DEHYDROGENASE-RELATED 23 174 - -
Vra7g3118 341 PANTHER NAD-DEPENDENT ALDEHYDE DEHYDROGENASE FAMILY PROTEIN 23 174 - -
Vra7g3118 341 PANTHER NAD-DEPENDENT ALDEHYDE DEHYDROGENASE FAMILY PROTEIN 175 341 - -
Vra7g3118 341 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 176 302 IPR016163 GO:0016620
Vra7g3118 341 SUPERFAMILY ALDH-like 173 337 IPR016161 GO:0016491
Vra7g3118 341 Pfam Aldehyde dehydrogenase family 175 331 IPR015590 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra7g3118 Vra-Chr7 50964874 50972130 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra7g3118 140 341 Aldehyde Dehydrogenase Gene Family AT3G24503 58.911 1.50e-83 260
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra7g3118 K12355 - gmx:100817721 323.553
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra7g3118 7 50964874 50972130 Vra1g0555 1 6495606 6501061 PCT