Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g3114 ATGGAGATGATCGGATGGTTGGAGATTGAGCTCGCAAAGAAAGAACGGAGACCGTCCGATGGGAAGCACGAAGCGTTCAAAGCTGCCAAGGTTTACTTTGGTATGCTTGATGCCGTATTGGCTGCTGAGGAACATGTTTGCTTATTACTTTGTAGGCCTGTTAGAAACCCATATGATATCAGTAAGATTGCAGGGGGTTCTTCTAGTGGATCTGCTTCTCTGGTGTCTGCTGGACTGTGTCTTGTTGCCCTTGGTGTCGATGGTGGAGGATCTGTAAGGATGCCAACATCTCTTTGCAGTGTTGTTGGTCTAAAACCAACTTTTGCACGTATACCTCATGATGGTTATGCAGCTATCAGTGGTGAGATTCCATATCAGAAGATTTTCAGTGTGTTGGTTTCAACTTGGTCACTTGTGCTTTTCAGTTCATATCTCAACAATTATGATGTGTGCACTGAGCTTAATCATAGTCTTGATGATAACATTGTGTGTTCTTACCTTGAAATTCCAGTTGCTTTATCTGAGTTCCCTGCATTGTTTAATGCACTTGATTATCTGTGCATAGATCCTATAGAGCATGTTGATGACACTGGTGCACTTATTGATTCTAAGGCTTCTAAAGCAGCATTTGAGATTGGACATCTTCATACTCCTGCTGAATGTATTGATATTACTGTTAACAAAGCTGCAACGTTTGATGATCCACTCATGAATGTTAACTTTGAATTTAGTGAATGTTCTGCAGAATTAAATGAAGAGGAAGCTGCACACACTGAAGGCATGAAAGAAGTCCTGGTTGAGCTAGTTGGGAAAGAAGAGCTCTGGAGTCTTACCCACTCACACATTGAAGGCAATGTGCCTCTTAAGTGTGGGAGTGGGAAGATTCTGATTCCGATTTTTGTTCCAGCTTTGAGAACTCTTTGTTTGGCCTTCAAAGATATAAACGAAATGCATGGGGAAGCCAACATTCCTGATAGTGGCTATACTCTAGTAGCATTAGTAGGAATCAAGGATCCTGTACGCCCTGGAGTTAAGGAAGCTGATGAAACTTGTAAAGCTGCTGCTGGTGATAACATACATACAGCTGAAGCTATAGCCAAAGAATGCAGTATACTTACTGAGGGTGGTGTAGCCATAGAAGGTCCAACGTTTCGTGACCTGTCTTCCGAGGAAATGATGGATATCATACCTAGGATCCAGGTGATGGCAGGATCCTTACCGCTCGACAAGTATAAGTTGGTAAACAATTTGAGGAGTATGTTTGGTGATGTTGTTGTTGTTATTGTTATGGACTGA 1296 0.4213 MEMIGWLEIELAKKERRPSDGKHEAFKAAKVYFGMLDAVLAAEEHVCLLLCRPVRNPYDISKIAGGSSSGSASLVSAGLCLVALGVDGGGSVRMPTSLCSVVGLKPTFARIPHDGYAAISGEIPYQKIFSVLVSTWSLVLFSSYLNNYDVCTELNHSLDDNIVCSYLEIPVALSEFPALFNALDYLCIDPIEHVDDTGALIDSKASKAAFEIGHLHTPAECIDITVNKAATFDDPLMNVNFEFSECSAELNEEEAAHTEGMKEVLVELVGKEELWSLTHSHIEGNVPLKCGSGKILIPIFVPALRTLCLAFKDINEMHGEANIPDSGYTLVALVGIKDPVRPGVKEADETCKAAAGDNIHTAEAIAKECSILTEGGVAIEGPTFRDLSSEEMMDIIPRIQVMAGSLPLDKYKLVNNLRSMFGDVVVVIVMD* 432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g3114 431 ProSitePatterns Amidases signature. 65 96 IPR020556 -
Vra7g3114 431 PANTHER CATION TRANSPORTING ATPASE 302 427 - -
Vra7g3114 431 Gene3D - 315 430 IPR023214 -
Vra7g3114 431 Gene3D Amidase signature (AS) domain 47 134 IPR036928 -
Vra7g3114 431 SUPERFAMILY Amidase signature (AS) enzymes 52 140 IPR036928 -
Vra7g3114 431 Pfam Amidase 52 121 IPR023631 -
Vra7g3114 431 SUPERFAMILY HAD-like 325 425 IPR036412 -
Vra7g3114 431 PANTHER CALCIUM-TRANSPORTING ATPASE 302 427 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra7g3114 Vra-Chr7 50902516 50909128 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra7g3114 303 427 Primary Pumps ATPases AT2G41560 65.414 4.62e-44 162
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra7g3114 K01537 - vra:106765888 834.328