Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g3069 ATGGCTCCCAAGTCTCTGATCCTTTTGGCTGTGTTATCCTTTTCAGCAGTGTCACTGAGTCCTTCTCTTGCTGAAGATAATGGCCTTGTGATGAACTTCTACAAGGAAACTTGTCCTCAGGCTGAAGACATCATCAAAGAACAAGTCAAGCTTCTCTACAAGCGCCACAAGAACACTGCTTTCTCTTGGCTCCGAAACATCTTCCATGACTGTGCTGTTCAGAGCTGTGATGCTTCACTGTTGCTGGACTCCACAAGAAGGACCTTGTCTGAGAAGGAGACAGACAGAAGCTTCGGTTTGAGGAATTTCAGGTACATTGAGACCATCAAAGAAGCTGTGGAAAGGGAGTGCCCGGGAGTTGTTTCCTGTGCTGATATACTCGTTCTCTCTGCCAGAGATGGCATTGTTTCGCTAGGAGGCCCCCATATCCCTCTTAAAACTGGAAGAAGGGATGGTAGAAGGAGCAGAGCTGATGTGGTTGAACAGTTCCTCCCAGACCACAATGAGTCCATTTCTTCAGTTCTTGACAAGTTTGGTGCCATGGGAATTGACACTCCCGGGGTGGTTGCTTTGCTTGGAGCACACAGTGTTGGTAGAACACACTGTGTGAAGTTGGTGCACCGTTTGTACCCGGAGATTGATTCTGCACTGAACCCTGAGCATGTCCCTCACATGCTGAAGAAGTGCCCTGATGCCATTCCAGATCCCAAGGCCGTGCAGTATGTGAGAAACGACCGTGGCACCCCCATGATTCTAGACAACAACTACTACAGAAACATATTGGACAACAAGGGGTTGCTGATAGTGGATCACCAACTAGCCAATGACAAGAGGACCAAGCCTTATGTGAAGAAAATGGCCAAGAGCCAAGACTATTTCTTCAAGGAGTTTTCTAGAGCCATCACCTTGCTCTCTGAAAACAATCCTCTCACTGGCACTAAGGGAGAGATCAGAAAGCAGTGCAATGTTGCCAACAAGCACCGTGAGGAGCCTTGA 996 0.4809 MAPKSLILLAVLSFSAVSLSPSLAEDNGLVMNFYKETCPQAEDIIKEQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRRTLSEKETDRSFGLRNFRYIETIKEAVERECPGVVSCADILVLSARDGIVSLGGPHIPLKTGRRDGRRSRADVVEQFLPDHNESISSVLDKFGAMGIDTPGVVALLGAHSVGRTHCVKLVHRLYPEIDSALNPEHVPHMLKKCPDAIPDPKAVQYVRNDRGTPMILDNNYYRNILDNKGLLIVDHQLANDKRTKPYVKKMAKSQDYFFKEFSRAITLLSENNPLTGTKGEIRKQCNVANKHREEP* 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g3069 331 PANTHER PEROXIDASE 25-RELATED 24 324 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vra7g3069 331 Gene3D Peroxidase, domain 2 165 304 - -
Vra7g3069 331 PANTHER PEROXIDASE 42 24 324 - -
Vra7g3069 331 CDD secretory_peroxidase 28 323 IPR033905 GO:0004601|GO:0042744
Vra7g3069 331 SUPERFAMILY Heme-dependent peroxidases 29 325 IPR010255 GO:0004601|GO:0006979|GO:0020037
Vra7g3069 331 PRINTS Plant peroxidase signature 38 57 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vra7g3069 331 PRINTS Plant peroxidase signature 62 82 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vra7g3069 331 PRINTS Plant peroxidase signature 101 114 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vra7g3069 331 PRINTS Plant peroxidase signature 120 130 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vra7g3069 331 PRINTS Plant peroxidase signature 139 154 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vra7g3069 331 PRINTS Plant peroxidase signature 186 198 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vra7g3069 331 PRINTS Plant peroxidase signature 243 258 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vra7g3069 331 PRINTS Plant peroxidase signature 259 276 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vra7g3069 331 PRINTS Plant peroxidase signature 299 312 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vra7g3069 331 Gene3D - 32 325 - -
Vra7g3069 331 PRINTS Haem peroxidase superfamily signature 60 74 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vra7g3069 331 PRINTS Haem peroxidase superfamily signature 121 138 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vra7g3069 331 PRINTS Haem peroxidase superfamily signature 139 151 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vra7g3069 331 PRINTS Haem peroxidase superfamily signature 187 202 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vra7g3069 331 PRINTS Haem peroxidase superfamily signature 245 260 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vra7g3069 331 Pfam Peroxidase 46 289 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vra7g3069 331 ProSiteProfiles Plant heme peroxidase family profile. 28 325 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra7g3069 Vra-Chr7 50438089 50439992 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra7g3069 1 327 Peroxidase AT4G21960 78.723 0.0 554
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra7g3069 K00430 - gmx:547513 627.091