Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g3058 ATGCCGAAAAATACTCAAACACCGAATATGGCTGACTTGTTGGAATGGCCAAAGAAAGATAACCGTCGCATGCTCCATGTTGTCTACCGTGTTGGTGACCTTGATCGTACCATCAAGTTTTATACAGAATGCTTTGGAATGAAGCTTTTAAGGCATAGAGATATCCCGGATGAAAAATATGCCAATGCTTTTCTTGGATTTGGCCCTGAAGAATCCCATTTTGTTGTTGAATTAACATATAATTATGGGGTGACCTCGTATGAGATAGGGGATGGCTTTGGACATTTTGCAATTGCAACTCAGGATATTTACAAATCGGTTGAGCTCGTCCGAGCCAAGGGAGGAAACATCACTAGGGAGCCTGGACCAGTTCAGGGTGGGACTACTGTTATTGCCTTTGTGAAGGATCCAGATGGTTACACTTTTGGATTTATCCAAAGACCTACTGTCCATGACCCATTTTGTCAAGTAATGCTTCGTGTTGGAGATTTAGAACGCTCAATTAAGTTTTATGAAAAGGCTCTGGGCATGAAGGTTTTAAGGAAGGTTGATAAGCCTGAGTCCAAGTACACTGCAGTTATGCTTGGGTATGGAGAGGAGCATGAGACAACTGTGTTAGAGTTGACAAATAACTATGGTGTCACTGAATACTCTAAGGGCAATGCCTATGCACAGATTGCTATTGGTACTGATGATGTATACAAGAGTGCTGAGGTAGTTAGCCAAGTTATACAAGAGGTAGGAGGGAAGATTACAAGGCAACCAGGGCCAATTCCTGGCCTGAATACGAAAATCACTGCGTTTTTAGATCCAGACGGATGGAAAACTGTGTTGGTTGACAATGTTGATTTCTTGGAGGAACTGAAATGA 870 0.423 MPKNTQTPNMADLLEWPKKDNRRMLHVVYRVGDLDRTIKFYTECFGMKLLRHRDIPDEKYANAFLGFGPEESHFVVELTYNYGVTSYEIGDGFGHFAIATQDIYKSVELVRAKGGNITREPGPVQGGTTVIAFVKDPDGYTFGFIQRPTVHDPFCQVMLRVGDLERSIKFYEKALGMKVLRKVDKPESKYTAVMLGYGEEHETTVLELTNNYGVTEYSKGNAYAQIAIGTDDVYKSAEVVSQVIQEVGGKITRQPGPIPGLNTKITAFLDPDGWKTVLVDNVDFLEELK* 290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g3058 289 Pfam Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 24 143 IPR004360 -
Vra7g3058 289 Pfam Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 156 275 IPR004360 -
Vra7g3058 289 ProSitePatterns Glyoxalase I signature 1. 156 177 IPR018146 GO:0004462|GO:0046872
Vra7g3058 289 PANTHER LACTOYLGLUTATHIONE LYASE 12 289 - -
Vra7g3058 289 ProSiteProfiles Vicinal oxygen chelate (VOC) domain profile. 23 147 IPR037523 -
Vra7g3058 289 Gene3D - 150 289 IPR029068 -
Vra7g3058 289 TIGRFAM glyox_I: lactoylglutathione lyase 11 155 IPR004361 GO:0004462|GO:0046872
Vra7g3058 289 TIGRFAM glyox_I: lactoylglutathione lyase 155 283 IPR004361 GO:0004462|GO:0046872
Vra7g3058 289 CDD GlxI_Ni 24 145 - -
Vra7g3058 289 ProSitePatterns Glyoxalase I signature 1. 26 47 IPR018146 GO:0004462|GO:0046872
Vra7g3058 289 ProSiteProfiles Vicinal oxygen chelate (VOC) domain profile. 153 281 IPR037523 -
Vra7g3058 289 SUPERFAMILY Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 154 281 IPR029068 -
Vra7g3058 289 SUPERFAMILY Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 22 153 IPR029068 -
Vra7g3058 289 Gene3D - 3 147 IPR029068 -
Vra7g3058 289 PANTHER LACTOYLGLUTATHIONE LYASE-LIKE PROTEIN 12 289 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra7g3058 Vra-Chr7 50342112 50345616 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra7g3058 156 280 Calmodulin-binding Proteins AT1G08110 29.333 6.02e-11 59.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra7g3058 K01759 - gmx:100793089 534.258
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra7g3058 7 50342112 50345616 Vra10g0964 10 15424731 15428287 PCT