Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g3040 ATGGCGAAAGTGATTGCTGTTTCCATAGGTTTGCCATTGATGGCAGTGATTCTGATCTCCATGTTCATGGCTGCTATAACTTGCTTGAAGGAAGAAGAGCGTTCGATATACTTGGTCTTAATGGAAGGAGATGCACTTGCTTCCATTCACCAACATTCTTCAACAATGCAATCCAACAGAGAAGCTTCAAAGACACATGCAAAGCACTTAATATCATCTCACGATCAATTTCTGCAAACAACCTTGGATACAGGAAGCTACAACAAACTCCACAGTTATAAACACATTATCAATGGTTTTTCTGTCCACACAACCCCTTCCCAGGCTGAAAGACTAAGAAGTAAGCCGGGAGTTAAGTTGGTAGAGAAAGACAGAGGAGTGAAAAGGATGACAACTTACACACCTGAATTTTTAAGTTTACCAAAGGGAATATGGGCGAAAGAAGGAGGAGAAACAAATGCAGGTGAAGGAGTTGTGATTGGTTTCGTGGATAGTGGCATCAACCCTTTTCATCCAAGCTTTGCTTACGATCCCATGCTACCTTTCAAATCAAACCTCTCTCGTTTTGACGGTGCCTGCATTACGGGTCCTCTCTTCCCTCCTACTTCCTGCAATGGAAAGATAGTGGCCGCCAGGTACTTCTCTGCTGGGGCTGAAGCTGCTGCTACCCTCGATCCTTCCAAGGATTTTCTTTCACCCTATGATGCAGATGGACATGGCAGTCATGTGGCATCTATTGCTGCTGGAAATGCTGGTGTTCCTGTTGTAGTCAACAGTTTTTGCTACGGGAAAGCTAGTGGAATAGCACCACGTGCAAGGATTGCAGTTTATAAGGCTATTTATCCATCCGTGGCAACTCTAGCAGATGTTATTGCTGCGATCGATCACGCTGTTCTTGATGGAGTGGATATCTTATCGCTATCTGTGGGACCAAACGGACCACCAGAAGATACGTTAACATTCTTAAACATGTTTGACATTTCTTTGTTGTTTGCACGAAAAGCAGGAGTTCTCGTGGTGCAAGCTGCGGGGAACAACGGTCCAGCATCTTCAAGTGTAGTGTCATTCAGTCCCTGGAGTGTCACTGTTGCCGCTAGCACCACAAACAGAAGGTACCCTTCTTCACTTGTACTTGGAAATGGCGCAGTACTTAGTGGCGTGGGACTATCAGGACCAAGTTTTGGAAATGGATCAGTTTGGCATAAGCTTGTTTTAGCTAAGGATGCGGTCAAAAAGAGTGGAACAAGTCCAAAGACCGAGTACATTGAGGAGTGCCAACATCCAGAAGTTTTGGACCCTCACATAGTGTTGGGAAGTATCATTATCTGCACGTTTTCAGGTGGGTTCTATAATGGCACCTCAACTCTTGCTGGTATTATTGGCACCGTGAAGGCTCTGGGAATGGAGGGCTTTGTTTTAGTTGCGAACCCAAGCTATGGTGATTATATTGCAGAGCCAATGCCTTTTGCCTTTTCTGGTATTTTGATCCCTCGTGTGGAGGATGCCAAGGCTATATTAAAGTACTATGAAGAAAGAACAAAGAGGAACAAGAAAGGAAATGCCGGAGAGTTTGGTGCTTTGGCAGCTGTGGGAGAAGGAAGACTTGCCTCTTTCACAGGGAGATCGCCTATAGTCAGTAGATTTTCTTCAAGGGGTCCAGATATCATTGACAATAAAAAACATGTTGCAGATGTACTTAAACCCGATATTCTTGCTCCAGGACACCAAATCTGGGCAGCCTGGGCTCCCATCAGTGCCTCAGAACCTTTCCTCAGAGGGAACAGTTTTGCATTGTTATCTGGTACCAGCATGTCCACACCTCATGTGGCTGGAATAGCAGCACTGATGAAGCAACACAATCCATCATGGACTCCATCCATGATAGCTTCTGCAATCTCTACAACAAGCTCAAAGTATGACCATCTTGGACAGCCTATAATGGCAGAAGGCTATGAGGTCAACACCTTGCTACCCGCCACTCCTTTTGATTACGGCTCAGGCTTTGTCAACGCCAGTCGTGCCGTTGATCCTGGTTTGGTACTTTCATCTGATTATGCAGACTTCATCAGCTTCCTGTGCTCTTTGCCGGACGTAGACACGGATGCAGTCGTTGCAGCTACTGGAGAGCAATGCAATCACCCATTTGCCTATCCTTTCAGTCTAAACCTTCCTTCAGTTACAGTATCTGCGCTGAGAGGATCAGTTTCTGTCCGAAGAACTTTCACGAATGTGGGGAACACCACAGAGACGTACTTGGCCACTGTTCGTCCACCAAATGGAACTGACATCTGCCTCCATCCAACTTGGTTTACCTTAACTCCTCTAGGAACGCAAGATTTGGATATACATATCAGTGTCGTCCAACCAATGCAGAATTTTACCTTTGGTGAAATTGTTCTCACAGGAAATTTAAACCACATTGTACGAATAACATTGTCAGTGTTCGCGATTTCAGTGTAA 2460 0.452 MAKVIAVSIGLPLMAVILISMFMAAITCLKEEERSIYLVLMEGDALASIHQHSSTMQSNREASKTHAKHLISSHDQFLQTTLDTGSYNKLHSYKHIINGFSVHTTPSQAERLRSKPGVKLVEKDRGVKRMTTYTPEFLSLPKGIWAKEGGETNAGEGVVIGFVDSGINPFHPSFAYDPMLPFKSNLSRFDGACITGPLFPPTSCNGKIVAARYFSAGAEAAATLDPSKDFLSPYDADGHGSHVASIAAGNAGVPVVVNSFCYGKASGIAPRARIAVYKAIYPSVATLADVIAAIDHAVLDGVDILSLSVGPNGPPEDTLTFLNMFDISLLFARKAGVLVVQAAGNNGPASSSVVSFSPWSVTVAASTTNRRYPSSLVLGNGAVLSGVGLSGPSFGNGSVWHKLVLAKDAVKKSGTSPKTEYIEECQHPEVLDPHIVLGSIIICTFSGGFYNGTSTLAGIIGTVKALGMEGFVLVANPSYGDYIAEPMPFAFSGILIPRVEDAKAILKYYEERTKRNKKGNAGEFGALAAVGEGRLASFTGRSPIVSRFSSRGPDIIDNKKHVADVLKPDILAPGHQIWAAWAPISASEPFLRGNSFALLSGTSMSTPHVAGIAALMKQHNPSWTPSMIASAISTTSSKYDHLGQPIMAEGYEVNTLLPATPFDYGSGFVNASRAVDPGLVLSSDYADFISFLCSLPDVDTDAVVAATGEQCNHPFAYPFSLNLPSVTVSALRGSVSVRRTFTNVGNTTETYLATVRPPNGTDICLHPTWFTLTPLGTQDLDIHISVVQPMQNFTFGEIVLTGNLNHIVRITLSVFAISV* 820
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g3040 819 PANTHER SUBTILISIN-LIKE PROTEASE SBT2.6 54 810 - -
Vra7g3040 819 Pfam Fibronectin type-III domain 721 814 IPR041469 -
Vra7g3040 819 ProSitePatterns Serine proteases, subtilase family, aspartic acid active site. 160 171 IPR023827 -
Vra7g3040 819 CDD PA_subtilisin_like 375 509 - -
Vra7g3040 819 SUPERFAMILY Subtilisin-like 130 679 IPR036852 GO:0004252|GO:0006508
Vra7g3040 819 CDD Peptidases_S8_3 130 637 IPR034197 -
Vra7g3040 819 Gene3D - 369 538 - -
Vra7g3040 819 ProSitePatterns Serine proteases, subtilase family, histidine active site. 239 249 IPR022398 -
Vra7g3040 819 Pfam Subtilase family 155 639 IPR000209 GO:0006508|GO:0008236
Vra7g3040 819 Gene3D - 692 816 - -
Vra7g3040 819 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 54 810 IPR045051 -
Vra7g3040 819 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 24 129 IPR037045 -
Vra7g3040 819 ProSiteProfiles Serine proteases, subtilase domain profile. 135 675 - -
Vra7g3040 819 ProSitePatterns Serine proteases, subtilase family, serine active site. 601 611 IPR023828 -
Vra7g3040 819 PRINTS Subtilisin serine protease family (S8) signature 155 174 IPR015500 -
Vra7g3040 819 PRINTS Subtilisin serine protease family (S8) signature 235 248 IPR015500 -
Vra7g3040 819 PRINTS Subtilisin serine protease family (S8) signature 600 616 IPR015500 -
Vra7g3040 819 Gene3D Peptidase S8/S53 domain 157 688 IPR036852 GO:0004252|GO:0006508
Vra7g3040 819 Pfam Peptidase inhibitor I9 59 129 IPR010259 -
Vra7g3040 819 SUPERFAMILY Protease propeptides/inhibitors 87 127 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra7g3040 Vra-Chr7 50209934 50215174 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra7g3040 14 817 Subtilisin-like Serine Gene Family AT1G62340 57.369 0.0 936
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra7g3040 - - gmx:100798915 1264.6