Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g3036 ATGAAAGCTTCAAAGCAGCAGAAGCAGAATCAGCTCCAACAAAGAGGATGCAAGGCCTTGTGTTGCAGCTGCAGGTTCAGTGTTTCTTCTTCTGAAGAAGCAGAAAGCTCAGCCTCTGATAGGTTCCCTTCTGTTTCAAGCCTTGCACACGCCATGGTGCAAGAGAGACTTGACCAAATGATTAGAGAAAGGATGGAAGCTAGTCATGTAGAGAGAAGAAGACAGCAGAGCAGTGAAGGGACAAAGTTTGTCGTCATGGTAGCAATGGAGAAGAGCTCTTATGATCCAAGACTAGATTTTAGAGAGTCCATGATGGAGATGATAACTGCCAACCGCCTTCAAGACGCCAAAGATCTTCGTAGTCTATTGAACTATTATATCTCCATGAACTCTAATCAGTATCATAGTCTTATACTTGAGGTTTTTCATGAGGTTTGTACTAATTTGTTCTTATCATGTAAATGCCATTGA 471 0.4204 MKASKQQKQNQLQQRGCKALCCSCRFSVSSSEEAESSASDRFPSVSSLAHAMVQERLDQMIRERMEASHVERRRQQSSEGTKFVVMVAMEKSSYDPRLDFRESMMEMITANRLQDAKDLRSLLNYYISMNSNQYHSLILEVFHEVCTNLFLSCKCH* 157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g3036 156 ProSiteProfiles OVATE domain profile. 89 148 IPR006458 -
Vra7g3036 156 PANTHER TRANSCRIPTION REPRESSOR-RELATED 12 151 - -
Vra7g3036 156 TIGRFAM A_thal_3678: uncharacterized plant-specific domain TIGR01568 87 150 IPR006458 -
Vra7g3036 156 Pfam Transcriptional repressor, ovate 93 150 IPR006458 -
Vra7g3036 156 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 12 151 IPR038933 GO:0045892
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra7g3036 Vra-Chr7 50175458 50175949 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Vra7g3036 Ovate 1.8e-20 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra7g3036 - - var:108330150 286.96