Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g3032 ATGAAGCTCGACAACTCCAACGGCCAGCCGCCCCTCGCTCCCGCCCTTCCGCCGCCGCAGGAGGACCCCACCGACGCCGAAGCCGATGGGATATTCGTCCCGCCCCTCAACTTCGCCATGGTCGACAACGGCATTTTTCGGTCTGGCTTTCCCAATTCTGCTAATTTCGGTTTCCTGAAATCGCTCCGTCTTCGTTCCGTAATATGTTTGTGTCCTGAACCGTATCCAGAAACGACGTCGGAATTTTTGAAGGACAACGGAATAAGACTTTATCAGTTCGGGATCGATGGCTGTAAGGAACCCTTTGTCAACATCCCAAACAATACAATTCGGGAAGCTTTGAAAGTAGCCCTCGATGTTAAAAATCATCCCCTTTTGATTCATTGTAAACGAGGAAAGGTATGCATTATGAATTTGTTCTTAAGAATTTATTTTCGTTACTTTTTGGAATTATTATTCTTCAATTTCTCAGTTATTCATGATCAGCACCGCACTGGTTGCCTTGTCGGATGCATAAGAAGATTGCAGAGATGGTGTCTATCATCTGTTTTTGATGAGTACCAAAGGTTTGCAGGTGCCAAAGCAAGGGTGTCAGACCAGAGGTTCATCGAATTATTTGATATATCCTGTTTGAAGCACCACCAACTGCCATTTTCATGCTCAAGGAAATAG 672 0.4539 MKLDNSNGQPPLAPALPPPQEDPTDAEADGIFVPPLNFAMVDNGIFRSGFPNSANFGFLKSLRLRSVICLCPEPYPETTSEFLKDNGIRLYQFGIDGCKEPFVNIPNNTIREALKVALDVKNHPLLIHCKRGKVCIMNLFLRIYFRYFLELLFFNFSVIHDQHRTGCLVGCIRRLQRWCLSSVFDEYQRFAGAKARVSDQRFIELFDISCLKHHQLPFSCSRK* 224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g3032 223 CDD PFA-DSP_Siw14 32 207 - -
Vra7g3032 223 PANTHER TYROSINE-PROTEIN PHOSPHATASE 161 221 - -
Vra7g3032 223 PANTHER TYROSINE-PROTEIN PHOSPHATASE 21 133 - -
Vra7g3032 223 PRINTS Plant and fungal dual specificity phosphatase signature 32 49 IPR020428 GO:0016791
Vra7g3032 223 PRINTS Plant and fungal dual specificity phosphatase signature 69 82 IPR020428 GO:0016791
Vra7g3032 223 PRINTS Plant and fungal dual specificity phosphatase signature 88 102 IPR020428 GO:0016791
Vra7g3032 223 PRINTS Plant and fungal dual specificity phosphatase signature 105 119 IPR020428 GO:0016791
Vra7g3032 223 Gene3D Protein tyrosine phosphatase superfamily 157 210 IPR029021 -
Vra7g3032 223 Gene3D Protein tyrosine phosphatase superfamily 31 135 IPR029021 -
Vra7g3032 223 Pfam Tyrosine phosphatase family 33 135 IPR004861 -
Vra7g3032 223 Pfam Tyrosine phosphatase family 160 216 IPR004861 -
Vra7g3032 223 PANTHER TYROSINE-PROTEIN PHOSPHATASE DSP1 21 133 - -
Vra7g3032 223 PANTHER TYROSINE-PROTEIN PHOSPHATASE DSP1 161 221 - -
Vra7g3032 223 MobiDBLite consensus disorder prediction 1 28 - -
Vra7g3032 223 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 163 208 IPR029021 -
Vra7g3032 223 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 32 133 IPR029021 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra7g3032 Vra-Chr7 50149692 50153385 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra7g3032 19 223 Protein tyrosine phosphatase (PTP) family AT4G03960 60.386 6.73e-87 253
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra7g3032 K18045 - gmx:100785520 335.109