Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g2989 ATGGATGAACAACTGAGGTTGCTAAAAGTGATTGTTGTGCAAGGGAAAAGATTAGTGATCCGGGATTTCAAGAGCAGTGACCCTTATGTTGTTGTCAAGCTGGGGGATCAGACAGCAAAGACCAGGGTCATCCATTGTTCCTTGAATCCGGTTTGGAATGAAGAGCTGAGTTTTACTCTGACTGAACCTTTTGGACTTCTGAATTTGGAAGTGTTTGACAAAGATTATCTGAAGGCTGATGACAAGATGGGGAGTAGTTATCTGAATCTTCAACCATTGATGTCTGCATCTAGATTAAGAGATATTTTAAAGGTGTCATCTGCCTCTGGTGAGACAACATTGAGGAAGGTGACAGCAGACAGTGAAAATTGTCTTGCCCGTGAAAGCAGTATCAGTTGTGTTAATGGTGAAGTGGTACAAAATGTTTGGTTAAGGCTTCGTGGGGTTGAATCTGGGGAGCTACAATTGACTATCAAGTTGATCACTTCCTCAAATTAA 498 0.4157 MDEQLRLLKVIVVQGKRLVIRDFKSSDPYVVVKLGDQTAKTRVIHCSLNPVWNEELSFTLTEPFGLLNLEVFDKDYLKADDKMGSSYLNLQPLMSASRLRDILKVSSASGETTLRKVTADSENCLARESSISCVNGEVVQNVWLRLRGVESGELQLTIKLITSSN* 166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g2989 165 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 4 161 IPR035892 -
Vra7g2989 165 Gene3D C2 domain 5 165 IPR035892 -
Vra7g2989 165 ProSiteProfiles C2 domain profile. 1 103 IPR000008 -
Vra7g2989 165 Pfam C2 domain 8 100 IPR000008 -
Vra7g2989 165 CDD C2_ArfGAP 7 152 - -
Vra7g2989 165 PANTHER PROTEIN C2-DOMAIN ABA-RELATED 11 1 163 - -
Vra7g2989 165 PANTHER PROTEIN C2-DOMAIN ABA-RELATED 4 1 163 IPR044562 -
Vra7g2989 165 SMART C2_3c 7 102 IPR000008 -
Vra7g2989 165 PRINTS C2 domain signature 22 34 IPR000008 -
Vra7g2989 165 PRINTS C2 domain signature 46 59 IPR000008 -
Vra7g2989 165 PRINTS C2 domain signature 67 75 IPR000008 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra7g2989 Vra-Chr7 49814700 49816447 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra7g2989 1 161 C2H2 Transcription Factor Family AT4G21160 39.130 8.06e-34 120
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra7g2989 - - gmx:100798217 283.493
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra7g2989 7 49814700 49816447 Vra10g0857 10 14530154 14532437 PCT