Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g2985 ATGGAGATGGAGTACCCAGAAAACTACTGCTACAGAAACAGCAGCAGCGTGTGTGAGATAGAGGAGGAAGAGGAGAAAGAAGAAGAAGAAGAAAAAGAAGAACAAGACTGTGTTTATGTTGCAGTGGGTAAGAGCAACACAAGCATGCACGCTCTCTCATGGACACTTAACAACTTGGTTACTCAATCTACCATCATTTTTCTCATTCATGTATTCCCTCAGATCAAACTCATTCCAAATCCCCTGGGAATAGGAATGGTTCCAAGGAATGCAGTGAGTGTTGAGCAGGCGGAGAGTTATGTTGAGCAAGAAAGAGGCAAGAGGAGAGAGCTCCTTCAGAAGTTCCTACAATCATGTTCTTCTTCCAAGGTTAAGGTAGACACCATCCTGATTGAGAGTGACATGGTTGCAAAGCCTATCCTCGACCTCATTCCCATTCTTCAGATTAAAACTCTAGTCATTGGAGCCAACAAATTCCATCTCAGAAAATCAAAATCAAGGAAAGGGAATAATAGTGTTGCTGATGAGATACTGAGAAATTCACCAGAAAGTTGCAAGGTGAGAATTATATGTGAAGGGATGGAAGTAAATGAGCAGATGATGATGTCACCCACTAACCATACTTCCATGACTAGCCAAAAGAAAGAAGACAACCATGATTCAGTTTCATGCATTTGTTTCATACCGAAGTTCAAATGA 699 0.4134 MEMEYPENYCYRNSSSVCEIEEEEEKEEEEEKEEQDCVYVAVGKSNTSMHALSWTLNNLVTQSTIIFLIHVFPQIKLIPNPLGIGMVPRNAVSVEQAESYVEQERGKRRELLQKFLQSCSSSKVKVDTILIESDMVAKPILDLIPILQIKTLVIGANKFHLRKSKSRKGNNSVADEILRNSPESCKVRIICEGMEVNEQMMMSPTNHTSMTSQKKEDNHDSVSCICFIPKFK* 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g2985 232 Coils Coil 13 38 - -
Vra7g2985 232 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 52-LIKE 10 231 - -
Vra7g2985 232 PANTHER ADENINE NUCLEOTIDE ALPHA HYDROLASES-LIKE SUPERFAMILY PROTEIN 10 231 - -
Vra7g2985 232 Coils Coil 94 114 - -
Vra7g2985 232 CDD STK_N 38 193 - -
Vra7g2985 232 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 39 182 - -
Vra7g2985 232 Gene3D HUPs 31 202 IPR014729 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra7g2985 Vra-Chr7 49789552 49790860 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra7g2985 41 212 Plant U-box Gene Family AT5G57035 26.163 1.26e-11 62.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra7g2985 - - gmx:100527773 293.508
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra7g2985 7 49789552 49790860 Vra10g0852 10 14487927 14489601 PCT