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Gene search
Sequence information
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Gene
Cds
Cds_length
GC_content
Pep
Pep_length
Vra7g2960
ATGGAAGGAGTACCGCACCCAGTACCCAGAACTGTCGAAGAGGTTTTCACCGACTTTAAGGGCAGACGCTCCGGTTTGATCAAGGCCCTCACCACCGACGTTGAAAAGTTTTACCAGCAGTGCGATCCTGAGAAGGAGAATCTGTGTCTATATGGGTTTCCAAATGAAACTTGGGAAGTAAATTTGCCTGTCGAGGAAGTGCCTCCTGAACTTCCTGAGCCGGCATTAGGTATAAACTTTGCCAGGGATGGCATGCAAGAGAAGGACTGGCTATCACTGGTTGCAGTTCACAGTGACTCATGGCTGCTCGCTGTTGCCTTTTACTTTGGTGCCCGCTTTGGATTTGGTAAGAATGAAAGGAAAAGGCTTTTCCAGATGATAAATGATCTGCCAACAATCTTCGAACTTGTGACTGGAAGTGTTAAGCAATCAAAGGATCAACCAGCTGCTCACAACAATGGTAGCAAATTCAAATCAAGTGGAAAGTCCCGTCAGTCTGAATCTCAAGCCAAGGGGATGAAGATGTCTGCACCACCTAAAGAGGAGGATGATAGTGGAGAGGAAGAAGAAGAAGATGACGAACAAGGTGCAACATGTGGTGCTTGCGGTGATAATTATGGCACTGATGAATTCTGGATCTGTTGTGATATGTGTGAAAGATGGTTCCATGGTAAATGTGTTAAAATCACTCCCGCTAAGGCTGAGCACATCAAGCAATACAAGTGCCCTAGCTGCAGTAACAAGAGGGTTAGAGTTTGA
759
0.4598
MEGVPHPVPRTVEEVFTDFKGRRSGLIKALTTDVEKFYQQCDPEKENLCLYGFPNETWEVNLPVEEVPPELPEPALGINFARDGMQEKDWLSLVAVHSDSWLLAVAFYFGARFGFGKNERKRLFQMINDLPTIFELVTGSVKQSKDQPAAHNNGSKFKSSGKSRQSESQAKGMKMSAPPKEEDDSGEEEEEDDEQGATCGACGDNYGTDEFWICCDMCERWFHGKCVKITPAKAEHIKQYKCPSCSNKRVRV*
253
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Annotation information
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Seq ID
Length
Analysis
Description
Start
End
IPR
GO
Vra7g2960
252
MobiDBLite
consensus disorder prediction
144
172
-
-
Vra7g2960
252
MobiDBLite
consensus disorder prediction
144
197
-
-
Vra7g2960
252
SMART
PHD_3
198
246
IPR001965
-
Vra7g2960
252
PANTHER
CPG BINDING PROTEIN
7
252
IPR045104
GO:0006355|GO:0042393
Vra7g2960
252
SUPERFAMILY
FYVE/PHD zinc finger
187
249
IPR011011
-
Vra7g2960
252
Pfam
Alfin
11
138
IPR021998
GO:0006355|GO:0042393
Vra7g2960
252
Gene3D
Zinc/RING finger domain, C3HC4 (zinc finger)
188
247
IPR013083
-
Vra7g2960
252
ProSiteProfiles
Zinc finger PHD-type profile.
196
248
IPR019787
-
Vra7g2960
252
ProSitePatterns
Zinc finger PHD-type signature.
199
245
IPR019786
-
Vra7g2960
252
PANTHER
ALFIN-LIKE TRANSCRIPTION FACTOR-RELATED
7
252
-
-
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Duplication type information
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Gene
Chromosome
Start
End
Duplicated_type
Vra7g2960
Vra-Chr7
49566718
49573606
Transposed
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Functional genes information
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Gene
Gene_start
Gene_end
Function
Ath_gene
Identity(%)
E-value
Score
Vra7g2960
1
249
Alfin-like Transcription Factor Family
AT1G14510
80.723
1.33e-134
378
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Transcription factors information
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Regulatory Factors
Family
Gene
Hmm_acc
Hmm_name
E_value
Clan
TF
Alfin-like
Vra7g2960
Alfin
2e-69
No_clan
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Pathway information
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Query
KO
Definition
Second KO
KEGG Genes ID
GHOSTX Score
Vra7g2960
-
-
gmx:100807826
484.567
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