Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g2914 ATGGGTTGTGTCCATGGCAAGTGTTGCTGTGGTGAGCATACTTCATCAGACGATGGTTCTACGGATTACCGAGAAACCGGCTTCGTTCGTAGCCACAGGAAAAACATACTCGCACAGAGATCACTGAAGCGTGCTCCTGTTCCTTCTCACAACTTCATTTTGGAATACACTTTTTTCACTCAGCGAGGGTACTACCCCGACTCACCTGATAAAGAAAACCAAGATAGTTTTTGCATTAGTACAAATCTCCAAGGTAACCCCAATGTTCATTTCTTTGGCGTCTATGATGGGCATGGTCAATTAGGTAGTCAGTGTTCAAATTTCGTTAAGGAGAGGCTGGTAGAGAAGTTGGTTAATGACCCTGCATTCTTGGAGGATCCTGTCCAAGCTTACAATTCTGCATTTTTGGCAACGAACCAAGAATTACGTAGTAGTAATGAGATTGATGATTCTATGAGTGGTACCACCGCGATAACGGTGCTTGTTATCGGTGACACCCTTTATGTTGCTAATGTTGGTGATTCGAGAGCGGTGCTGGCTGTTAAGGACGGGAACCGCATTGTCGCGGAGGACTTGTCCTCTGATCAGACGCCGTTTCGGAAAGATGAATATGAGAGAGTGAAGCTCTGTGGGGCAAGGGTTTTGAGTGTTGATCAGGTGGAAGGGCTCAAGGATCCAGATATCCAGAGTTGGGGTGATGAAGAGAGTCGGGGTGGTGATCCTCCCAGATTGTGGGTTCCTAATGGGATGTATCCTGGAACTGCTTTTACGAGGAGTATAGGGGATAGTTTAGCAGAGACAATTGGTGTCACTGCTCTTCCTGAGGTGAAAACTTTTCAGCTTACACCTGATCATCTTTTCTTTGTGGTGGCAAGTGATGGCATATTTGAATTCCTGACAAGTCAAACTGTTATTGATATGTCAGGTACATTTAGAGTTGGATCAGATGACATAAATGTTGGCGCTGTACTGAATTCCAGGACAGGAACTCCTGAGATACCCGCTGCACATGAATCTGATGTTCATCGTTCTGTCAGAACCAGTTTCTCAGAGTTGCACTCTGATCAGCCTGAGGCTTCAGTGATGGGCCCAGTTCACTCTGCAGAATGTCCAAGACCAATTGAATGA 1128 0.4566 MGCVHGKCCCGEHTSSDDGSTDYRETGFVRSHRKNILAQRSLKRAPVPSHNFILEYTFFTQRGYYPDSPDKENQDSFCISTNLQGNPNVHFFGVYDGHGQLGSQCSNFVKERLVEKLVNDPAFLEDPVQAYNSAFLATNQELRSSNEIDDSMSGTTAITVLVIGDTLYVANVGDSRAVLAVKDGNRIVAEDLSSDQTPFRKDEYERVKLCGARVLSVDQVEGLKDPDIQSWGDEESRGGDPPRLWVPNGMYPGTAFTRSIGDSLAETIGVTALPEVKTFQLTPDHLFFVVASDGIFEFLTSQTVIDMSGTFRVGSDDINVGAVLNSRTGTPEIPAAHESDVHRSVRTSFSELHSDQPEASVMGPVHSAECPRPIE* 376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g2914 375 ProSitePatterns PPM-type phosphatase domain signature. 91 99 IPR000222 GO:0043169
Vra7g2914 375 MobiDBLite consensus disorder prediction 346 375 - -
Vra7g2914 375 CDD PP2Cc 71 307 IPR001932 -
Vra7g2914 375 Gene3D - 49 353 IPR036457 -
Vra7g2914 375 Pfam Protein phosphatase 2C 73 307 IPR001932 -
Vra7g2914 375 SMART PP2C_4 51 323 IPR001932 -
Vra7g2914 375 ProSiteProfiles PPM-type phosphatase domain profile. 55 375 IPR001932 -
Vra7g2914 375 SUPERFAMILY PP2C-like 47 318 IPR036457 -
Vra7g2914 375 PANTHER PROTEIN PHOSPHATASE 2C AND CYCLIC NUCLEOTIDE-BINDING/KINASE DOMAIN-CONTAINING PROTEIN 22 315 - -
Vra7g2914 375 PANTHER CYCLIC NUCLEOTIDE-DEPENDENT PROTEIN KINASE 22 315 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra7g2914 Vra-Chr7 49190462 49193878 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra7g2914 1 311 PP2C-type Phosphatase Gene Family AT3G06270 68.690 3.72e-151 428
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra7g2914 - - gmx:100797866 621.698
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra7g2914 7 49190462 49193878 Vra7g2914 7 49190462 49193878 ECH