Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g2894 ATGGACTGCAATAAAGAAGAGGCCTCAAGGGCCAAAAATATTGCTGAAAAGAAGATGGAAAACAGTGATTTTGCAGGGGCTCGTAAAATTGCTCTTAAGGCTCAGCAGCTGTACCCTGATCTGGAAAATATTGCTCAAATGCTTGTTGTCTGTGATGTGCACTGCTGTGCCGAGAAGAAATTGTATGGTAATGAAATAGATTGGTATGAAATTCTTCAGGTTGAACAGACCGCTGTTGATGCACTGATTAAGAAGCAATATAGAAAGTTTGCCCTCCAACTCCATCCTGACAAAAACAAGTTTCCTGGTGCTGAAGCCGCATTTAAGCTGATTGGGGAAGCTCAAAGAGTACTTCTGGACAGAGAAAAACGTAATGTTTTTGACATGAAGCGTAGAGTTCCGATGAACAAACCTGCTACATCACATTTTAATACTACTGCGCCGAGGAATGTTAGGTCTAACTTTACAAGCTCAACTTCTCAGCACCAGCAGCAGCAGCAAAATGGTGCACGAGATACATTTTGGACAGTCTGCCCATTTTGTTCTGTTAAGTATCAATATTACAAAGAAATTTTAAAGAAATCTCTTCGCTGTCAACAATGTAACAGGCCCTTTGTTGCATATGAAATGGGAAAACAAGGTACACCATCTCCTGCAACTAATTCAACTCAGCAAGCTTCTGACCAGCAGAAAGGTGGTTTGAATCATGGTGCTTTCAAGGTAGGTGCTGAATCTCAAAACAATTCACATGCTGAGAAATCCAATATAGGGTCATCTCCAGCAACTAATTCAACCCAGCAAGCTTCTGACCAGCAGAAAGGTGGTTTGAATCATGGTGCTTTCAAGGTAGGTGCTGGATCTCGAAGCAATTCACATGCTGAGAAGTCCAATATGGGGTCATCTGATAAAAAGTTACCTGCTAGTGTTTCTCGAAAACATAATGGAAAGAGAAAAAGGAAGCAGGTGGCAGAATCCAGTGAAAGTTCTGTTCCTTTGATCCACAGTGATTCTGAAGAAGATGGAGTTGCTGGAAAGGATGGTTATTCCAAAGTAGAAAACCATTCAACTACGAGAGAAGGGCATCTACGAAGATCTACCCGGAAAAGGCATCAGGTTTCCTACAAGGAGAATTTGAACAACATTGACGATGGTGAGAAAAGTAAAATGAATGACCCTAATGATTTACGTGCTGCACGCAGAGAAGTAAATCAGAAAAAGCACCTGTATTCAGAAATAAATGAGGAAACTAACACATTTAAGGGAAAAGATGTGGTGGGAGGGGCAAAGCAGGTGGATGAAACCTCAGAGCATTCTCCAGATTCAACCGTCAAAGTATCAAATCAACCAAATGTTTATGCCTTCCTTGATGCAGAATTCAGTGATTTTGACAAGGACAAGAGAAAAGAATGTTTTGCTGCTGGGCAGATTTGGGCTGTTTATGACACAGCAGAAGGTATGCCTAGATTCTATGCTTTAATCAGGAAAGTTCTATCTCCTGGATTCAAACTGCGGTTAACATGGTTCGAATCACATCCAGACTGGAAGGATGAAATGAACTGGGTGAACGAGGAATTGCCTGTTGCTTGTGGGAAATATAAACTTGGTAACACTGATGTCACGGAAGATCGTCTGATGTTCTCTCATCTGGTTTTGTGTGAAAAAATTAGCCGTACTACTTTTAAAGTGTATCCTAGAAAGGGAGAAACTTGGGCCCTTTATAAAAATTGGGATATTAAATGGTACATGGATGCGAAATCTCACCAGCTGTATGAATATGAGTTTGTTGAAATCTTGACAGATTATGTTGAAGATGAGGGTGTATATGTTGTTTACTTGACTAAGTTGAAAGGTTTTGTAAGTATCTTCCTTCAAAATATAAAGGGATCTAAAAAATCATTTCAAATTCCACCACGGGAGTTATTTAGATTCTCTCACAGGGTTCCATCTTTCAAAATGACTGGTGAGGAAAGGGCCGGTGTACCCTCAGGATCTTATGAACTTGATCCTGGAGCTTTGCCAGCACATTTTGAAGAGAAAGTTGGTGACGGCTCATCTGGCTGTGAGAATACAGGCACTTCAGATAGATCAGAATCCCTGATGTCTGAGGGAGGTAGGTCCACTCCCGAGGTTAATGGCAGCAATGATTGTTGTGCTCCTCTGGCACCAGAAACAATTGAAATTCCAGATACTCATTTCTTTAATTTTGACGCCGGGAGATCCCTTGAGAAGTTTCAGATTGGTCAAATTTGGGCATTTTACAGTGACGAGGATGGATTGCCAAAATATTACGGTCGCATTAACAAGATTGTGACTAGTCCTGATCTTGAATTGCATGTTTCCTGGCTTACTTGCTACTGGCTACCAGAGAATACCACTGAATGGGAGGACAAAGATATGGGTGTGCTTATTTCATGCGGTCGATATAACGTTAATAAAACAGATGAATTTCTCAGTATTTTTAGTACCACCTCTTCTGTTTCACATCAAGTGCATGCTGAATCTGTTGGAAAGAATACAAAATATGCGATCTTTCCGAGGAAAGGTGAAGTTTGGGCGTTATATAGAAAATGGACAAATAAAATGAAATGTTCTGAGTTGAAAAATTGGGAGTATGACATAGTGGAAGTTATCGAAGAAACTGATTTGTTCATTATTGTCTTAGTTCTGGAGTTTGTCAGTGGGTTTAGTTCCGTTTTCAGGGGCAAATCAAATGAAATATCATCTGTCAAGCTGAGAATACCAAGAAAAGAGTTGCTTAGGTTCTCCCACCGAATCCCAGCTTTCAAACTGACAGAAGAGCATGGCAAACTCAGAGATTTCTGGGAACTTGATCCCGGTGCTCTACCAACACATTATTTTGGCTTGAGATGA 2871 0.4061 MDCNKEEASRAKNIAEKKMENSDFAGARKIALKAQQLYPDLENIAQMLVVCDVHCCAEKKLYGNEIDWYEILQVEQTAVDALIKKQYRKFALQLHPDKNKFPGAEAAFKLIGEAQRVLLDREKRNVFDMKRRVPMNKPATSHFNTTAPRNVRSNFTSSTSQHQQQQQNGARDTFWTVCPFCSVKYQYYKEILKKSLRCQQCNRPFVAYEMGKQGTPSPATNSTQQASDQQKGGLNHGAFKVGAESQNNSHAEKSNIGSSPATNSTQQASDQQKGGLNHGAFKVGAGSRSNSHAEKSNMGSSDKKLPASVSRKHNGKRKRKQVAESSESSVPLIHSDSEEDGVAGKDGYSKVENHSTTREGHLRRSTRKRHQVSYKENLNNIDDGEKSKMNDPNDLRAARREVNQKKHLYSEINEETNTFKGKDVVGGAKQVDETSEHSPDSTVKVSNQPNVYAFLDAEFSDFDKDKRKECFAAGQIWAVYDTAEGMPRFYALIRKVLSPGFKLRLTWFESHPDWKDEMNWVNEELPVACGKYKLGNTDVTEDRLMFSHLVLCEKISRTTFKVYPRKGETWALYKNWDIKWYMDAKSHQLYEYEFVEILTDYVEDEGVYVVYLTKLKGFVSIFLQNIKGSKKSFQIPPRELFRFSHRVPSFKMTGEERAGVPSGSYELDPGALPAHFEEKVGDGSSGCENTGTSDRSESLMSEGGRSTPEVNGSNDCCAPLAPETIEIPDTHFFNFDAGRSLEKFQIGQIWAFYSDEDGLPKYYGRINKIVTSPDLELHVSWLTCYWLPENTTEWEDKDMGVLISCGRYNVNKTDEFLSIFSTTSSVSHQVHAESVGKNTKYAIFPRKGEVWALYRKWTNKMKCSELKNWEYDIVEVIEETDLFIIVLVLEFVSGFSSVFRGKSNEISSVKLRIPRKELLRFSHRIPAFKLTEEHGKLRDFWELDPGALPTHYFGLR* 957
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g2894 956 MobiDBLite consensus disorder prediction 678 713 - -
Vra7g2894 956 Pfam DnaJ domain 67 128 IPR001623 -
Vra7g2894 956 Coils Coil 395 415 - -
Vra7g2894 956 MobiDBLite consensus disorder prediction 241 274 - -
Vra7g2894 956 ProSiteProfiles dnaJ domain profile. 67 131 IPR001623 -
Vra7g2894 956 MobiDBLite consensus disorder prediction 212 392 - -
Vra7g2894 956 SUPERFAMILY Chaperone J-domain 62 133 IPR036869 -
Vra7g2894 956 CDD DnaJ 67 120 IPR001623 -
Vra7g2894 956 PANTHER DNAJ HEAT SHOCK AMINO-TERMINAL DOMAIN PROTEIN 258 953 - -
Vra7g2894 956 PANTHER DNAJ HEAT SHOCK AMINO-TERMINAL DOMAIN PROTEIN 1 257 - -
Vra7g2894 956 SMART dnaj_3 66 123 IPR001623 -
Vra7g2894 956 MobiDBLite consensus disorder prediction 420 445 - -
Vra7g2894 956 MobiDBLite consensus disorder prediction 137 169 - -
Vra7g2894 956 PANTHER - 1 257 - -
Vra7g2894 956 PANTHER - 258 953 - -
Vra7g2894 956 MobiDBLite consensus disorder prediction 214 232 - -
Vra7g2894 956 MobiDBLite consensus disorder prediction 685 713 - -
Vra7g2894 956 MobiDBLite consensus disorder prediction 289 304 - -
Vra7g2894 956 MobiDBLite consensus disorder prediction 138 169 - -
Vra7g2894 956 Pfam Domain of unknown function (DUF3444) 452 656 IPR024593 -
Vra7g2894 956 Pfam Domain of unknown function (DUF3444) 722 933 IPR024593 -
Vra7g2894 956 MobiDBLite consensus disorder prediction 371 392 - -
Vra7g2894 956 MobiDBLite consensus disorder prediction 338 360 - -
Vra7g2894 956 Gene3D DnaJ domain 64 174 IPR036869 -
Vra7g2894 956 PRINTS DnaJ domain signature 69 87 IPR001623 -
Vra7g2894 956 PRINTS DnaJ domain signature 87 102 IPR001623 -
Vra7g2894 956 PRINTS DnaJ domain signature 103 123 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra7g2894 Vra-Chr7 49066351 49070636 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra7g2894 4 299 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 32.119 1.96e-30 122
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra7g2894 - - pvu:PHAVU_003G100000g 1409.43
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra7g2894 7 49066351 49070636 Vra7g2894 7 49066351 49070636 ECH
Vra7g2894 7 49066351 49070636 Vra10g1065 10 16406694 16411823 PCT