Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g2877 ATGGGTTGTATTCTCTCTTGCTTTAATGGATTAGCAACCATGGGGGAATCTGATGACGACAGGACACATTCTACCACAGATAGAAGAGCAAGATCAGAGAGTCCAATTGTCATTAAACGTGCAAAAGTATTTTCATCCATAGAGCTTGCAGCAGCTACAAAGCATTTCAGGTCAAGATTTCTGCTAGGTAGAGGGTGCTCTGATGGGAGTGTGTACAAAGGTCGACTCAAAAACGGCCAAGATGTTGCTGTGAAAGTGCTTGAAAAAAATTCCCAAGAAAAAGACGGAGAGTTTGTCGCGGAGGTTGAGAAGCTGTCTCTCTTGTATCACCCAAATCTTGTGACACTGATTGGTTACTGTTGCGAATGTGATCGACGGCTACTTGTTTACGAGTATATGCCATTGGGGTCCTTGGAGAATCATTTATTCGATCTTCCTCCTCGCAGGGAACCACTTGACTGGCATACAAGGATGAAGATAGCAAGCGGTGTGGCAAAAGGATTGGAGTATTTGGAGAATTGGAGAGACCTTCCTGTGATGTTTGGAGAGTTCAAATCATCGAACATCCTCCTGGACGAGGGTTATAATCCCAAGTTGTATTATTTTGCGACCCTTGGTAATAGCAGTCATGTTTCAACAGGAAAATATGCAGTGACCGGCAACCTAACTCCGGAATGTAATGTCTACGGTTTTGGAGTGGTCCTTCTCGAACTCATTTCGGGGCGGAAAGCCATTGATTCCCCTGAAACGTGCAACCTTGTTAAGTGGGCACGACCTATTTTGAAGGACAATAAGTTCTATAGGTTGGTGGATCCTCTACTTCACGGGATATATCCAGAGGAATGGGTTAATCAGGTGATTGTTATTGCAGCTATGTGTTTGCATGAAAAAGCTGATAGAAGGCCTACGATACGGGAAGTGGTTTCTGCTCTAACGTACATGGAATCACAGCATGATAACAGAACGGGTCGACTCCCATGCGCATTCTTCTACCCATCTGTTGGCAGAAAAGAAACTGGATTGGAGAAAGAACGGAAGAAAGGGGATTTTGAGAGAGGCAGTGCCAGTTATGCTGCAGATATTCCAAAGCAAAGAGTTGGGTACATACAAATGCTAGAGATGTGA 1125 0.4427 MGCILSCFNGLATMGESDDDRTHSTTDRRARSESPIVIKRAKVFSSIELAAATKHFRSRFLLGRGCSDGSVYKGRLKNGQDVAVKVLEKNSQEKDGEFVAEVEKLSLLYHPNLVTLIGYCCECDRRLLVYEYMPLGSLENHLFDLPPRREPLDWHTRMKIASGVAKGLEYLENWRDLPVMFGEFKSSNILLDEGYNPKLYYFATLGNSSHVSTGKYAVTGNLTPECNVYGFGVVLLELISGRKAIDSPETCNLVKWARPILKDNKFYRLVDPLLHGIYPEEWVNQVIVIAAMCLHEKADRRPTIREVVSALTYMESQHDNRTGRLPCAFFYPSVGRKETGLEKERKKGDFERGSASYAADIPKQRVGYIQMLEM* 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g2877 374 PANTHER OS07G0668900 PROTEIN 29 327 - -
Vra7g2877 374 SUPERFAMILY Protein kinase-like (PK-like) 33 318 IPR011009 -
Vra7g2877 374 Gene3D Phosphorylase Kinase; domain 1 26 132 - -
Vra7g2877 374 ProSiteProfiles Protein kinase domain profile. 56 314 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vra7g2877 374 Pfam Protein tyrosine and serine/threonine kinase 62 311 IPR001245 GO:0004672|GO:0006468
Vra7g2877 374 PANTHER OS07G0668900 PROTEIN 29 327 - -
Vra7g2877 374 Gene3D Transferase(Phosphotransferase) domain 1 133 325 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra7g2877 Vra-Chr7 48939732 48941861 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra7g2877 41 319 Glycoside Hydrolase AT3G07070 48.161 4.39e-85 262
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Vra7g2877 PK_Tyr_Ser-Thr 1.7e-24 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra7g2877 - - var:108330065 546.969