Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g2846 ATGGAGGATTCCTTAGAAAAAAAATGGAAGCAGCGAGAGTTCACTTTAGCATCAGTTTCCGACTTATCTGCCGTTACTCCTTCCGCTTTGCCGGGAACAGCTCGCTTCGACTCCGACGGTCTCCAAATTCATCAGCAATCTCATCAGATTCCACTCAATATCGATCCTCGAACTGTTCAGCTATTCAGGCTGAGTCCTGTTCACTCCGTTTGCATGGTGGAAGGATCTGATGCGGGTAAAAAGGCATCTTATTCCAGGGGAGTCAATATCCAGTTTAGAAACGAGGAGGAGAGTGAAGCGTTCCATTGTGTAGTCCAACAATGGAAGAAGGAAATCAATGCTCAAGGAGCAAATGGGCGAAATCAATCAAATATAACTTCTAAAAGCAAATTTGATGAAAAGATAGAGTCATCATCTGCCAAAATGTATTTTCATTACTACGGACAACTTTTGCATCAGCAAAATATGTTACAAGACTATGTGCGGACAGGAACCTATCATGCTGCTGTTATTGAGAACCGGTCTGATTTCACTGGTCGTGTTGTAGTTGATGTGGGTGCTGGTAGTGGTATTTTATCACTATTTGCTGCTCAGGCTGGTGCAAAACACGTTTATGCTGTGGAAGCATCTGAAATGGCAGAATATGCACGGAAACTTATAGCTGGAAACCCAATGCTAGCTCAACGAATTACAGTGATCAAAGGCAAAGTTGAGGATGTTGAATTGCCAGAGAAAGCAGATATTCTGATATCTGAGCCCATGGGAACCTTGTTAATCAATGAAAGAATGTTGGAGTCTTATGTCATTGCCAGAGATAGGTTTCTTGTTCCTACGGGGAAAATGTTTCCAGCTCTGGGAAGGATTCACATGGCACCTTTCACTGATGAATATTTGTTTATAGAAATTGCTAATAAGGCACTGTTTTGGCAGCAACAGAACTATTATGGTGTTGATTTAACACCCCTACATGGGACTGCATTTCAAGGATACTTTTCTCAGCCTGTGGTGGATGCTTTTGATCCAAGACTGTTAATAGCTCCTTCAATATCCCATGTGATAGACTTCACCAAAATAAAGGAGGAAGAACTGTATGAAATTGATATTCCTCTGAGATTCATAGCTTCCGTGGGAACCAGAGTGCATGGCTTAGCTTGTTGGTTTGATGTGCTTTTCAATGGAAGTACTGTGCAAAGGTGGCTCACCACTGCTCCTGGGTCACCGACAACCCATTGGTACCAGTTGCGTTGTGTTCTCTCACAGCCAATATACGTCATGGCTGGACAAGAAATTACTGGCAGGCTTCACTTGATTGCCCACAATGCACAGAGTTATACAATTTATTTAACATTGTCAGCTAAAATGTGGGGTCCTGGTGCTGAACAAGGGGGAATTCTCCAAACATCTTCCTGTAAACTTGATCTGAAAGAACCCTATTATAGAATGTCTCAACCACAGGCTTATGCATTAGCTCAAGATCAACAACCTCAACCACTTATACCAACGCAGGATTTAGATGAACCTGAATTTGTACAACAGCCTTCGCCTAATTCATGTGTCCAGATTGATCCACTGATGCAGAATATTTAA 1587 0.4222 MEDSLEKKWKQREFTLASVSDLSAVTPSALPGTARFDSDGLQIHQQSHQIPLNIDPRTVQLFRLSPVHSVCMVEGSDAGKKASYSRGVNIQFRNEEESEAFHCVVQQWKKEINAQGANGRNQSNITSKSKFDEKIESSSAKMYFHYYGQLLHQQNMLQDYVRTGTYHAAVIENRSDFTGRVVVDVGAGSGILSLFAAQAGAKHVYAVEASEMAEYARKLIAGNPMLAQRITVIKGKVEDVELPEKADILISEPMGTLLINERMLESYVIARDRFLVPTGKMFPALGRIHMAPFTDEYLFIEIANKALFWQQQNYYGVDLTPLHGTAFQGYFSQPVVDAFDPRLLIAPSISHVIDFTKIKEEELYEIDIPLRFIASVGTRVHGLACWFDVLFNGSTVQRWLTTAPGSPTTHWYQLRCVLSQPIYVMAGQEITGRLHLIAHNAQSYTIYLTLSAKMWGPGAEQGGILQTSSCKLDLKEPYYRMSQPQAYALAQDQQPQPLIPTQDLDEPEFVQQPSPNSCVQIDPLMQNI* 529
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g2846 528 Gene3D - 285 493 - -
Vra7g2846 528 PANTHER HISTONE-ARGININE METHYLTRANSFERASE 1.4-RELATED 1 491 - -
Vra7g2846 528 PANTHER PROTEIN ARGININE N-METHYLTRANSFERASE 1 491 IPR025799 GO:0016274|GO:0018216
Vra7g2846 528 ProSiteProfiles SAM-dependent methyltransferase PRMT-type domain profile. 136 451 IPR025799 GO:0016274|GO:0018216
Vra7g2846 528 Pfam Ribosomal protein L11 methyltransferase (PrmA) 178 252 - -
Vra7g2846 528 CDD AdoMet_MTases 182 253 - -
Vra7g2846 528 Gene3D Vaccinia Virus protein VP39 121 283 IPR029063 -
Vra7g2846 528 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 146 457 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra7g2846 Vra-Chr7 48598016 48604088 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra7g2846 143 432 C2H2 Transcription Factor Family AT3G12270 33.766 3.38e-38 146
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra7g2846 K05931 - gmx:100780736 969.918
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra7g2846 7 48598016 48604088 Vra7g2846 7 48598016 48604088 ECH
Vra7g2846 7 48598016 48604088 Vra5g0134 5 1118114 1125311 PCT