Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g2843 ATGGAGGAGCCTCAGTATCGGGAGCATCCAAAAACCAAAATCGCAGCCATTCCGCCGCCGCAGCACTCCGATGGGGCATCGGCGGAGTTGCGCGGCGTCGATTGCAACCTCGCTTCCCTCTGCGAGCATGTCCAAATCGAAGGCTTCAATTCGGGTTCCTTCTCCGACATCGTCGTCAATGCAATGGGTTCCACTTATCACCTTCATCGGCTTATCCTCTCGCGCAGTTCCTATTTCAGGAACATGCTTCACGGGCCTTGGAAAGAAGCCAGTGCTCCTGTTGTGACTCTGCATGTCGATGATAAGAATGTTAATGATGAGGCAATTGCAATGGCTTTGGCGTACCTATACGGGCACCACCCTAAGCTTAATGATAATAATGCATTTCGTGTTCTTGCTGCTGCATCCTTTCTCGACCTTCAGGATTTGTGTGGAATTTGTACAGATTTCATTATATCTGAGCTGTGGACTTCAAACTTCTTGGCTTATCAGGTGTTTGCGGAGAACCAAGACTATGGCATTCATGGGGAGCGTGTTAGAACTGCTTGCTGGGGTTACCTTTGTCAAAGTGGTGGCATGGAATTGAAAGAGGTGCTTCCTAAACTTTCATCGCAAACATTACATGCATTATTGACTTCTAATGATCTATGGATACCCAATGAAGAGAAACGGTTTGAATTGGCTTTGCACACATTCCTGGCAAAAGGTGCTCATTGCAAGGTTGAACATCCTTCGCATGGAATTTCTGATTCTGAGTCTGCTACTGGTATTCATGCTGATTCTATTAACAGCAAAGGAAAAAGTATAATTGATGGCTGCACTACTAAGAGGTTGGAAACTGACCTTGGGAAAATGAATCTTAAAAGTGATCTAAAGGACCCAAGCACTTCAAGCGTTCTAGTTGAGCTTGCAGATCCAGTGGCAGACTTCAACGATAGTGTTTCTGTTTCCAATGAACAGGTTCAACAAACTTCATATGTCCGTACACCAAACCTGAATCCAAGATATTCTGGTGACATGGAAGGACCATCATTGGGTAATTCGTTGCCTGATACAGACGTGATGAGAACATCATGCTATGTGGACATGTCTCTTGGTGCTGAAGCTACTGCCATGGCAGCCCCTGGAGTGGTTCTTGAAGGGCCGTCAGAAGAAGGACCTTGCTACCAGTTGGAGGACAACAGTTGGTTTGTTAGGGATCCATCGAGACATTGTTTTTCATCAAATTCTTGTAATGAGCTCACGTCCAGTGATTGGGGAAGATATGGAACACCGTTGTTTTCATGGAATGGCCAAGTTGTTGGCAGAAGACAGCTTAAAGCTCACCCCAGAGCAAACTACAGAGGTCATGGAGATGAATATGATGCATTTTTCAATATATTTGAAGGGGGATCCCTTTTATATTGCAATATGTCTTTTGATGCGCTTCTAAATGTCAGAAAGCAACTTGAAGAATTAGGTTTCCCTTGCAAAGCTGTAAATGATGGTCTTTGGCTTCAGATGCTTCTTAGTCAGAGAGTACAGGAAATTGCCGCTGATACCTGCAAAGTTTGCTCCCTCATGAATTGTACTTGTCAAAAGCAATTTGCATTTTCACATGGAGCTTCTACATCTGGATCTTACATGCAAGAACATAATCAGAACATTATGCCTGGCAGTGTGGGAAATATATATGTTGCTGAATCTTCTGCAGGTGAAAGAAATGGCCTTTTTAGACCTGTACGAGTGCATGTTAGAGGTGCTATTGATGGGCTTGCAGGTATTGGCCGTGGAACTAATTTTGTTCCGGCATCTGCTTCTCATCCTACACGTTTCGTCTTTTCTCGTGTACCATTAGGTGTTGGCAACAGAAACCATCCACAGTCTGCAGCCAATGATGATTCAGATACACGTGCTGACCCAAATGGAGACCTTTCTGGAGATGGATTGACAGCTGTAGTTGGGTTAAGCCTGGGAGGGAGTAATGGAACAAATGTGCATACAGAGCTAACACAGAGGGCATATGAAATAGGCATGCAAAGCAGCATGTCTGGAAGTAATGCTGGAGATGCAAGTACTGGTGGTATCCCCATGCAGATGTTAGAGACACCAGAACATACCATTGGTATAGAATGGGACAATGTCAACAGTGCTTCCATATCACTGGATATGAAAACACCTTTAAGCCATTTTCCCCCTTTTCGCTTTGGTGTACGTTTTGAGGATGTGCATAGGCTTGGTGATGGTCAGGTCAAGCATTCTACAGAAGTTTTCTACGCTGGTTCTTTGTGGAAGGTCAGTGTACAAGCTTTTAATGATGAAGACCCCCAGGGACGGCGAACCCTTGGGCTGTTTCTTCATCGTCGAAAAGCAGAGATAACCGATATACATAGAAAGGTGCACATGTATGTTGACTCACGTGAAAAGGTGACTGCACGCTACCAGTTGTCTGTCCCATCCAAGAGGGAAATGATGGTGTTTGGAAGCTTTAAACAAACAGGCACACTTCTACCTAAATATCCCAAGGGATGGGGTTGGCGAACTGCTCTGCTATTTGATGAGCTTGCTGATCTTCTCCAAAACGGTGCCCTAAGGGTAATTGCTGTAGTGCAGCTTGTATGA 2601 0.4479 MEEPQYREHPKTKIAAIPPPQHSDGASAELRGVDCNLASLCEHVQIEGFNSGSFSDIVVNAMGSTYHLHRLILSRSSYFRNMLHGPWKEASAPVVTLHVDDKNVNDEAIAMALAYLYGHHPKLNDNNAFRVLAAASFLDLQDLCGICTDFIISELWTSNFLAYQVFAENQDYGIHGERVRTACWGYLCQSGGMELKEVLPKLSSQTLHALLTSNDLWIPNEEKRFELALHTFLAKGAHCKVEHPSHGISDSESATGIHADSINSKGKSIIDGCTTKRLETDLGKMNLKSDLKDPSTSSVLVELADPVADFNDSVSVSNEQVQQTSYVRTPNLNPRYSGDMEGPSLGNSLPDTDVMRTSCYVDMSLGAEATAMAAPGVVLEGPSEEGPCYQLEDNSWFVRDPSRHCFSSNSCNELTSSDWGRYGTPLFSWNGQVVGRRQLKAHPRANYRGHGDEYDAFFNIFEGGSLLYCNMSFDALLNVRKQLEELGFPCKAVNDGLWLQMLLSQRVQEIAADTCKVCSLMNCTCQKQFAFSHGASTSGSYMQEHNQNIMPGSVGNIYVAESSAGERNGLFRPVRVHVRGAIDGLAGIGRGTNFVPASASHPTRFVFSRVPLGVGNRNHPQSAANDDSDTRADPNGDLSGDGLTAVVGLSLGGSNGTNVHTELTQRAYEIGMQSSMSGSNAGDASTGGIPMQMLETPEHTIGIEWDNVNSASISLDMKTPLSHFPPFRFGVRFEDVHRLGDGQVKHSTEVFYAGSLWKVSVQAFNDEDPQGRRTLGLFLHRRKAEITDIHRKVHMYVDSREKVTARYQLSVPSKREMMVFGSFKQTGTLLPKYPKGWGWRTALLFDELADLLQNGALRVIAVVQLV* 867
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g2843 866 MobiDBLite consensus disorder prediction 616 639 - -
Vra7g2843 866 MobiDBLite consensus disorder prediction 1 25 - -
Vra7g2843 866 Gene3D Potassium Channel Kv1.1; Chain A 29 188 IPR011333 -
Vra7g2843 866 PANTHER BTB/POZ DOMAIN-CONTAINING PROTEIN 7 866 - -
Vra7g2843 866 PANTHER BTB/POZ DOMAIN-CONTAINING PROTEIN 7 866 - -
Vra7g2843 866 ProSiteProfiles BTB domain profile. 55 125 IPR000210 GO:0005515
Vra7g2843 866 SMART BTB_4 55 155 IPR000210 GO:0005515
Vra7g2843 866 SUPERFAMILY POZ domain 49 153 IPR011333 -
Vra7g2843 866 Pfam BTB/POZ domain 49 153 IPR000210 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra7g2843 Vra-Chr7 48564263 48570419 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Vra7g2843 BTB 9.2e-14 CL0033
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra7g2843 - - gmx:100806711 1616.28
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra7g2843 7 48564263 48570419 Vra7g2843 7 48564263 48570419 ECH