Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g2838 ATGGGTGGCCAGATGCAGCAGAGCAATGCAGCGGCCACTGCTCTGTATGACCACGCCGGCGCCGGATCTCTCCATAATTCGGCGGGGCCGGCTACCGATGCCGGCGACGCCGTCATGGCGCGCTGGTTACAATCCGCCGGCTTGCAGCATCTGGCCTCTCCACTGGCTTCCACTGGTATCGACCAACGCCTCCTTCCCAATCTTCTTATGCAGGGTTATGGAGCGCAGTCTGCAGAAGAAAAGCAGAGGCTTTTTAAGTTAATGAGAAACCTCAATTTTAACGGGGAATCTGCTTCTGAGCCATATACTCCTACTTCCCAAAATTTAAGTGGAGTGACAGTATCAGATGGGTTTTATTCTCCAGACTTCAGGGGAGATTTTGGAGCCGGGCTTCTGGATCTTCACGCCATGGATGATACAGAGCTTTTGTCCGAGCATGTTATTTCAGAACCCTTTGAGCCATCACCCTTTATGCCTGGAGGTGCTAGAGCTTTTGAAGATGATTTCAATCCAATTAGCAGAAAGCAGGAAAGAGGAGAAGCAGATGCTGATGCATCAGTTTTTGTACCTACAAATGAAAAAGAGAATAATACAAGAGAAAACAATGTTGCTAAGATTAAAGTTGTGGTACGCAAAAGACCTTTAAATAAGAAGGAGCTTGCTAAGAAGGAGGATGACATTGTAACTGCATATGACAGTGCATATTTGACAGTCCATGAACCAAAACTAAAGGTGGATTTGACAGCTTATGTGGAGAAGCATGAGTTCTGTTTTGATGCTGTTCTTGATGAGAAAGTTACCAATGACGAAGTATATCGAGTTACAGTTGAACCAATAATTCCTACAATTTTTGAGAGAACCAAAGCTACTTGTTTTGCTTATGGTCAGACAGGTAGTGGCAAAACATACACAATGCAACCATTGCCGCTCAGAGCTGCTGAAGACCTTGTTAGACAGTTGCATCGACCAGCATATCGAAACCAGAGATTTAAATTGTGGCTTAGCTACTTCGAGATATATGGTGGAAAACTTTTTGATCTTCTTAGTGACAGAAAAAAACTCTGCATGAGAGAAGATGGACGGCAGCAAGTGTGTATTGTAGGACTTCAAGAATTTGAAGTGTCTGATGTACAGATTGTCAAAGAATTCATTGAAAAGGGGAATGCAGCCAGAAGTACGGGGTCAACTGGTGCCAATGAGGAGTCGTCCAGGTCCCATGCTATCTTGCAACTGGTCGTAAAGAGGCACAATGAGATAAAAGAGAGTAAGCGGAACAATAATGATGGAAATGAGGCAAAAAGTGGGAAGGTTGTGGGGAAGATATCTTTTATTGATCTTGCTGGAAGTGAAAGAGGTGCTGATACTACTGACAATGACCGTCAAACAAGGATCGAAGGTGCTGAAATCAACAAGAGTCTTTTGGCTTTGAAGGAGTGCATCCGTGCTTTGGACAATGATCAGATCCATATTCCTTTTCGGGGAAGCAAACTTACGGAAGTGCTCCGTGACTCCTTTGTTGGAAATTCAAAAACTGTTATGATCTCTTGTATATCCCCAAATGCTGGGTCTTGTGAACACACACTTAATACCTTGAGATATGCAGACCGAGTTAAAAGTCTATCCAAGAGTGGAAATCCTCGGAAGGACCAGGCCCCAAATCAAGTTCCACCAATCAATAAAGAGGCTTCACCCACATCTTCACTTCTTGCTAGCATGGGTACAGAGGATTTTAATGGTCAGCGTCAAGAGATAAAAGCAACGGACTTGGGCAGAAAAGCTGTAGAAAAGGAAAGTTCTTTGTACAGCTCTTCCACCGATGTTGACAAACAACTATCAAGTTTCTCTTCTAGTTATTCATACAATGGGCGAGAAGATAAAAGCCTGGCTTCTGCTCCAATGGACAGGGAAAGGTTTGAAGTAAAGAATTCTCACGGTGATTCTACCAGTCAAAAGATGAACTCTTATTCCCTAAATGTTATAGATGAGAAAGTGCAAAGGGTGTCTCCTCCACGCAGAAAAGGAACTAAGGAGGAGAAATCCGAAAGATCTATAAATTGGGTAAAAAGGGATTCCAATGCTTCTAATAACACCACAAGCTCCAAGCAGCAGAACACAGGAAATTATAACACAGTTAGCACTGGATCGGGGCAGTCTGAAACAGAATCCTCTTCTGACGTGAATATCAGCGCAATACTTGAGGAGGAAGAAGCACTAATTGCTGCTCATAGGAAAGAAATTGAGGACACAATGGAGATTGTTCGTGAAGAAATGAAACTATTGGCAGAAGTGGACCAGCCAGGAAGTCTAATTGACAATTATGTAACTCAGTTGAGTTTTGTGCTTTCTCGCAAAGCAGCTAGCCTGGTGAGTCTTCAAGCTCGTCTCGCAAGGTTCCAACATCGACTAAAAGAACAAGAGATACTAAGTAGAAAAAGAGTACCCCGTTAA 2448 0.4338 MGGQMQQSNAAATALYDHAGAGSLHNSAGPATDAGDAVMARWLQSAGLQHLASPLASTGIDQRLLPNLLMQGYGAQSAEEKQRLFKLMRNLNFNGESASEPYTPTSQNLSGVTVSDGFYSPDFRGDFGAGLLDLHAMDDTELLSEHVISEPFEPSPFMPGGARAFEDDFNPISRKQERGEADADASVFVPTNEKENNTRENNVAKIKVVVRKRPLNKKELAKKEDDIVTAYDSAYLTVHEPKLKVDLTAYVEKHEFCFDAVLDEKVTNDEVYRVTVEPIIPTIFERTKATCFAYGQTGSGKTYTMQPLPLRAAEDLVRQLHRPAYRNQRFKLWLSYFEIYGGKLFDLLSDRKKLCMREDGRQQVCIVGLQEFEVSDVQIVKEFIEKGNAARSTGSTGANEESSRSHAILQLVVKRHNEIKESKRNNNDGNEAKSGKVVGKISFIDLAGSERGADTTDNDRQTRIEGAEINKSLLALKECIRALDNDQIHIPFRGSKLTEVLRDSFVGNSKTVMISCISPNAGSCEHTLNTLRYADRVKSLSKSGNPRKDQAPNQVPPINKEASPTSSLLASMGTEDFNGQRQEIKATDLGRKAVEKESSLYSSSTDVDKQLSSFSSSYSYNGREDKSLASAPMDRERFEVKNSHGDSTSQKMNSYSLNVIDEKVQRVSPPRRKGTKEEKSERSINWVKRDSNASNNTTSSKQQNTGNYNTVSTGSGQSETESSSDVNISAILEEEEALIAAHRKEIEDTMEIVREEMKLLAEVDQPGSLIDNYVTQLSFVLSRKAASLVSLQARLARFQHRLKEQEILSRKRVPR* 816
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g2838 815 MobiDBLite consensus disorder prediction 687 725 - -
Vra7g2838 815 PRINTS Kinesin heavy chain signature 286 307 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vra7g2838 815 PRINTS Kinesin heavy chain signature 396 413 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vra7g2838 815 PRINTS Kinesin heavy chain signature 440 458 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vra7g2838 815 PRINTS Kinesin heavy chain signature 490 511 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vra7g2838 815 SMART kinesin_4 203 546 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vra7g2838 815 ProSiteProfiles Kinesin motor domain profile. 205 540 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vra7g2838 815 Gene3D Kinesin motor domain 184 543 IPR036961 -
Vra7g2838 815 Coils Coil 788 808 - -
Vra7g2838 815 MobiDBLite consensus disorder prediction 628 644 - -
Vra7g2838 815 MobiDBLite consensus disorder prediction 540 565 - -
Vra7g2838 815 MobiDBLite consensus disorder prediction 614 725 - -
Vra7g2838 815 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 196 540 IPR027417 -
Vra7g2838 815 PANTHER KINESIN-RELATED PROTEIN 6 676 814 - -
Vra7g2838 815 PANTHER KINESIN-RELATED PROTEIN 6 5 679 - -
Vra7g2838 815 CDD KISc_KIF2_like 205 538 - -
Vra7g2838 815 MobiDBLite consensus disorder prediction 544 565 - -
Vra7g2838 815 Pfam Kinesin motor domain 211 539 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vra7g2838 815 MobiDBLite consensus disorder prediction 645 661 - -
Vra7g2838 815 MobiDBLite consensus disorder prediction 665 686 - -
Vra7g2838 815 ProSitePatterns Kinesin motor domain signature. 439 450 IPR019821 GO:0003777|GO:0005524|GO:0007018
Vra7g2838 815 PANTHER KINESIN-LIKE PROTEIN 5 679 - -
Vra7g2838 815 PANTHER KINESIN-LIKE PROTEIN 676 814 - -
Vra7g2838 815 Coils Coil 732 763 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra7g2838 Vra-Chr7 48526808 48536266 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra7g2838 197 540 Calmodulin-binding Proteins AT5G65930 34.463 3.74e-43 167
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra7g2838 7 48526808 48536266 Vra7g2838 7 48526808 48536266 ECH