Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g2818 ATGAATTCCAACTACGGCCAATCCAACACGAACAAATCCCCCTCCGTTTCCCTCAACAACTTCAATTTCGATTTCGATCTTGGCATCGGATCCAACCGTCCCAAGTCCCTCAACGACCAGAAAAACCCCAAAGCTTCCTATTCCACCACCACTACCACCACCTCTTCCTATTCCTATCCATATTCCTCCACCCAACCCAAAAAGCAACCCTCATGGACCCACCAACCCGCTCCCACTCAGACCACCGCCCTTCCCGGTGGCCCCCCCTCCATGGTCGGAGACATCTTCGGCAAAAGCTGGGGCACCACTCAACCTTCTGCCGCTTCCAAAAACATTGGGGTCGTTGATAAGAACCCTAATCTATTCGGAGATTTGGTTAGTTCTGCTTTGGGCGGGGGTTCCAAGTCTACTGCTACCAATGTTCCTCTCAAAAACGCTACCCCAACCCCCAATAAAACCTCCTTTTCCATGGGAAACATGGCCAACTCTTTGCCCAAAACTGGTACCACGCCACAGAACAGTGCTAGTTGGGCATCGTCTTCTGGGGGATTTAGCGTGAATGCCAACAAAACCCCCAATCTTGGGGGTACTTCAATGCGAAACATGGGTAGTGGAATTGGAACCAGTTCTAATAACAAGGATCCTTTTAGTTCTTTGTCTGGTTTTGGATCCAAGCAGTCGGCTACTCTTAATTCAGCTGCCAAAGGGCCGAAGGTTGCATCCGGGGATGATGGTTTTGGAGATTTCCAAAATGCTTCCAAATCGAGTTCGGATGGTTTTGGAGACTTTCAAAATGCTTCAAAACCAAGCTCACCTGCGTTTCCATCTGCTGCTTCTCCTGCGACTGATTTCAATTTTACCGGATCTGCCGCTTCCACTCAGAGTCCTGTTCAGGGATCAGGTGGTAGTGCAATGGACATGTTTTTCACGGCGGCTTCCTCGCCCGCGGTTGGAGGTGCTGCTTCGGCCTCTGATGGATTTGGTGGACATGACGATTGGGGTTTGGATTCGGAGTTTGGTGGGGGAGGCCATGATGTGGGTGACACCACTACTGAGCTTGAGGGGCTGCCTCCTCCTCCTGCTGGGGTCTCTGGTTCCACTGCAAAAGGCAAGGGGATGGACAACTACAAGCAGGGACAGTTTGCTGATGCTATTAAGTGGTTTTCGTGGGCCATTGTTCTTCTAGAGAAAGCTGGGGATGCTACCGCCACAGCTGAGGTTTTGTCATGCAGGTCTTCATGTTACAAAGAGGTCGGGGAGTATAAAAAGGCAGTGGCAGATTGTACCAAGATTCTTCAAAATGATGAAAGCAACGTAGCTGTCCTGGTACAGCGAGCTCTCTTGTACGAGAGTATGGAAAAGTACAAACTTGGTGCTGAAGACCTTAGGACTGTGCTGAAGATTGATCCTAGTAATAGGATTGCTAGAAGCACCGTTCACCGGTTGGCTCAGATGGCTGGTTAG 1464 0.5014 MNSNYGQSNTNKSPSVSLNNFNFDFDLGIGSNRPKSLNDQKNPKASYSTTTTTTSSYSYPYSSTQPKKQPSWTHQPAPTQTTALPGGPPSMVGDIFGKSWGTTQPSAASKNIGVVDKNPNLFGDLVSSALGGGSKSTATNVPLKNATPTPNKTSFSMGNMANSLPKTGTTPQNSASWASSSGGFSVNANKTPNLGGTSMRNMGSGIGTSSNNKDPFSSLSGFGSKQSATLNSAAKGPKVASGDDGFGDFQNASKSSSDGFGDFQNASKPSSPAFPSAASPATDFNFTGSAASTQSPVQGSGGSAMDMFFTAASSPAVGGAASASDGFGGHDDWGLDSEFGGGGHDVGDTTTELEGLPPPPAGVSGSTAKGKGMDNYKQGQFADAIKWFSWAIVLLEKAGDATATAEVLSCRSSCYKEVGEYKKAVADCTKILQNDESNVAVLVQRALLYESMEKYKLGAEDLRTVLKIDPSNRIARSTVHRLAQMAG* 488
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g2818 487 Gene3D Tetratricopeptide repeat domain 365 486 IPR011990 GO:0005515
Vra7g2818 487 SMART tpr_5 439 472 IPR019734 GO:0005515
Vra7g2818 487 SMART tpr_5 365 398 IPR019734 GO:0005515
Vra7g2818 487 SMART tpr_5 405 438 IPR019734 GO:0005515
Vra7g2818 487 MobiDBLite consensus disorder prediction 135 212 - -
Vra7g2818 487 ProSiteProfiles TPR repeat profile. 439 472 IPR019734 GO:0005515
Vra7g2818 487 PANTHER OS03G0340700 PROTEIN 1 486 - -
Vra7g2818 487 MobiDBLite consensus disorder prediction 248 279 - -
Vra7g2818 487 MobiDBLite consensus disorder prediction 23 103 - -
Vra7g2818 487 SUPERFAMILY TPR-like 369 479 IPR011990 GO:0005515
Vra7g2818 487 MobiDBLite consensus disorder prediction 33 86 - -
Vra7g2818 487 MobiDBLite consensus disorder prediction 331 370 - -
Vra7g2818 487 MobiDBLite consensus disorder prediction 233 279 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra7g2818 364 484 Calmodulin-binding Proteins AT3G25230 27.692 5.64e-09 56.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra7g2818 - - vun:114178472 842.802
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra7g2818 7 48379660 48385485 Vra7g2818 7 48379660 48385485 ECH