Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g2815 ATGGTTCTTTTTCCATCTTTTGTGAATGGATTGGCAAGAACCGTGTCAATCAAGAAGGAGAAGAATTGTAAAAGGGAAGATGGAAGGCCAGCTGCAGAAGAATTGGCAAAGGAAGCAAGGAAGAGTGAACTGTTACTGAGTTCATCTGGAGTTGTTAGGTCGACAAAGGCCAAAAATTTTGCTTCTATGTTCACTAATAGGGGACGGAAAGGAGTGAATCAGGATCGTCTTCTTGTTTGGGAGGAATTTGGATGCCAACAAGACATTATGTTCTGTGGAGTTTTTGATGGGCATGGCCCTTGGGGACACTTTGTAGCAAAAAGGGTCAAGAAACTAGTGCCAACAATTTTGCTGTGCAATTGGCAAGAAAATCTGGCTGCAACGTCACTTGACCTGGATTTTAAGATGGAAGCAGACAGACATATCCATGGTTTGAACGTGTGGAAGCAGTCCTACATCAAGACTTATGCTGCTGTTGATCAGGATCTGAAGCAGCAAACCGGGTTCGATTCATTTCTTAGTGGCACAACAGCATTGACAATTATCAAACAGGGTGAATATCTTATTACAGCAAACATAGGTGATTCTAGGGCTGTCTTGGCAACCACTTCAGAGGATGGCACATTAACTCCACATCAGCTTACCACTGACTTCAAGCCAAATTTACCACAGGAAGCTGAACGCATAACACAATGTAGAGGGCAGGTATTTAGTTTGGAAGATGAACCAGGAGTGTACAGGGTGTGGATGCCAAATGGTAAACCACCAGGACTAGCAATATCTAGAGCTTTAGGAGATCACTGCATGAAGGAATTTGGACTAATCTCTGTGCCTGATGTCACACAAACAAAAATTACAACCATGGATCAATTTGTCATATTGGCAACAGATGGGGTATGGGATGTTATATCCAATCAGGAAGCAGTGGAGATTGTTTCTGCAACACCACATAAAGAAAAAGCAGCTCAAAAGCTCGTTAAATGCGCCATACGTGAATGGAAGCGGAAGAAAAATGGCATTGCTATGGATGACATGTCAGCTATTTGCCTCTTCTTTCAGTCCTTCCCTTCTCAAAAAACCCCAGCCATTAAAACTGTTGATTAA 1104 0.4248 MVLFPSFVNGLARTVSIKKEKNCKREDGRPAAEELAKEARKSELLLSSSGVVRSTKAKNFASMFTNRGRKGVNQDRLLVWEEFGCQQDIMFCGVFDGHGPWGHFVAKRVKKLVPTILLCNWQENLAATSLDLDFKMEADRHIHGLNVWKQSYIKTYAAVDQDLKQQTGFDSFLSGTTALTIIKQGEYLITANIGDSRAVLATTSEDGTLTPHQLTTDFKPNLPQEAERITQCRGQVFSLEDEPGVYRVWMPNGKPPGLAISRALGDHCMKEFGLISVPDVTQTKITTMDQFVILATDGVWDVISNQEAVEIVSATPHKEKAAQKLVKCAIREWKRKKNGIAMDDMSAICLFFQSFPSQKTPAIKTVD* 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g2815 367 ProSiteProfiles PPM-type phosphatase domain profile. 60 352 IPR001932 -
Vra7g2815 367 SUPERFAMILY PP2C-like 53 354 IPR036457 -
Vra7g2815 367 CDD PP2Cc 59 352 IPR001932 -
Vra7g2815 367 PANTHER ALPHABET, ISOFORM E-RELATED 1 362 - -
Vra7g2815 367 Pfam Protein phosphatase 2C 81 332 IPR001932 -
Vra7g2815 367 PANTHER PROTEIN PHOSPHATASE 2C 41-RELATED 1 362 - -
Vra7g2815 367 Gene3D - 48 354 IPR036457 -
Vra7g2815 367 SMART PP2C_4 51 350 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra7g2815 Vra-Chr7 48361396 48363304 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra7g2815 1 353 PP2C-type Phosphatase Gene Family AT3G05640 56.620 9.57e-155 437
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra7g2815 - - gmx:100817397 650.203
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra7g2815 7 48361396 48363304 Vra7g2815 7 48361396 48363304 ECH