Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g2799 ATGCTCCTCCCAATCCAGTGTTGCTACCTCAGCACCATCGCCGCGCTAACAATCTTCCTCTCCACCACGTCGTTTTCCGACGCCCAATCCTGTAACGGCATCCTCGTTTCTTATGCCTATACCGGCGGCTCGCGGTTGCCGCCGAATGTCTCCAACGCTGCGGAGCAGCCCTACCGGTTCGAGTCGACATTGACAGTACTCAACAACGGCCTCGATGAACTCAAGTCGTGGAAGGTCTTCGTGGGTTTTGACCACGACGAGTTGTTGGTCTCTGCGTCCAATGCGGTTCTCGCCGACGGCACAACCCTCCCGGCCGCCGTTGGAAACGGCACTGTTTTCGCTGGCTACCCCATGACCGATCTCAAGACTGCCGTCGCCACCGCCGGCGACTTGACCCAGATGCAGGTTCAGATCAACCTCGTCGGCACCGTGTTCGGGGTGGCGCCGCCCAGTGTTCCGATGCCGAAATCCATCAACCTCGCCAATGATGGATTCGTATGTCGTGCATCCACCACCCAAGGGAAGAATGCTAGTAGTGTGTGCTGCACTAGAGATCCCAAGTTCAAAACTAACATCACCACGGATGAAGAGTTTCTGCCACGTCAGAATGGTGATCTTAGTATTATGTATGATGTGATAAGAACTTACGATTCTAATTACTGGGCTGAGGTTACTATTGCAAACCATAACCCACTTGGTAGGCTTGACAACTGGAGGTTGAGCTGGGACTGGATGAATGATGAGTTTATATATTCAATGAAAGGGGCTTATCCTTCTGTTGTTGATGCTTCTGAATGTCTGTTCGGTAAGCAAGGTACATTCTATAGGGATCTTGACTTTGCCACTGTTTTGAATTGTGAGAGAAGGCCAACCATAATTGATCTCCCTCCCACCAAGTTCAATGATTCTGACCTTGGGAAGATTCCCTTTTGCTGCCGGAATGGTACTATTTTGCCGCCCACCATGGACCCTAGCATGTCAGCCTCAAGATTCCAAATGCAGGTTTTCAAGATGCCACCGGCGCTTAACCGATCCCAACTTTCACCGCCGCAGAACTGGAAGATAAGTGGTACCCTAAACCCTGACTATAAATGCGGCCCTCCTGTAAGAGTGAGTCCCACGGAAAACCCCGATCCCTCCGGCTTACCGTCGAACAAAACTGTGATGGCCAGTTGGCAGGTTGTGTGCAACATTACGACAGCCAAGGGAACGTCAAGTAAATGCTGTGTATCATTTTCGGCCTATTACAATGATTCAGTTATTCCATGCAAAACATGTGCTTGTGGATGTCCCCAGAATAGAGAGAGAACATGTAGTACTACTGCCTCAGCTATGTTGCTTCCACCAGAGGCACTTCTTGTTCCTTATGAAAACAGAACCGCCAAGGCCATTGCTTGGGCAAGCCTGAAACATTTTCCAGTGCCAAACCCGATGCCCTGTAGTGATAACTGTGGTGTAAGCATCAACTGGCATTTGCTCACGGACTACAATAAAGGATGGAGTGCAAGGGTGACACTTTTTAACTGGGGTGAGACCAATTTTGCAGACTGGTTTGCTGCAGTTCAAATGGACAAAGCAGCTGCAGGTTTTGAGAAAATGTACTCTTTCAATGCAACTCTTGTAGATGGTGTAAACAACACAATTATTATGCAAGGTTTGCCAGGATTGAACTACCTTGTAGCAGAAGCTGACGGCGCTGACCCTCTGAGAGATCCTAGGGTGCCTGGTAAACAACAGTCAGTGATCTCTTTCACAAAGAAACTTACTCCTGGAATCAACACGGTTCGTGGAGATGGTTTTCCCACTAAAGTTCTTTTCAATGGAGAGGAATGCTCTCTTCCTTCCGTGCTTCCAACTAGTGGTGGTTCTTGGGATGGTTTTTCATTGGGAACTTCAGTGCTACTATCACTGTTGTCGTTCCTCTTGACGAGATGA 1935 0.4899 MLLPIQCCYLSTIAALTIFLSTTSFSDAQSCNGILVSYAYTGGSRLPPNVSNAAEQPYRFESTLTVLNNGLDELKSWKVFVGFDHDELLVSASNAVLADGTTLPAAVGNGTVFAGYPMTDLKTAVATAGDLTQMQVQINLVGTVFGVAPPSVPMPKSINLANDGFVCRASTTQGKNASSVCCTRDPKFKTNITTDEEFLPRQNGDLSIMYDVIRTYDSNYWAEVTIANHNPLGRLDNWRLSWDWMNDEFIYSMKGAYPSVVDASECLFGKQGTFYRDLDFATVLNCERRPTIIDLPPTKFNDSDLGKIPFCCRNGTILPPTMDPSMSASRFQMQVFKMPPALNRSQLSPPQNWKISGTLNPDYKCGPPVRVSPTENPDPSGLPSNKTVMASWQVVCNITTAKGTSSKCCVSFSAYYNDSVIPCKTCACGCPQNRERTCSTTASAMLLPPEALLVPYENRTAKAIAWASLKHFPVPNPMPCSDNCGVSINWHLLTDYNKGWSARVTLFNWGETNFADWFAAVQMDKAAAGFEKMYSFNATLVDGVNNTIIMQGLPGLNYLVAEADGADPLRDPRVPGKQQSVISFTKKLTPGINTVRGDGFPTKVLFNGEECSLPSVLPTSGGSWDGFSLGTSVLLSLLSFLLTR* 645
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g2799 644 PANTHER COBRA-LIKE PROTEIN 7 8 642 - -
Vra7g2799 644 Pfam COBRA-like protein 220 399 IPR006918 GO:0010215|GO:0031225
Vra7g2799 644 PANTHER COBRA-LIKE PROTEIN 7 8 642 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra7g2799 Vra-Chr7 48235485 48238067 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra7g2799 31 618 COBRA Gene Family AT4G16120 69.374 0.0 884
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra7g2799 - - gmx:100803929 1199.11
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra7g2799 7 48235485 48238067 Vra7g2799 7 48235485 48238067 ECH
Vra7g2799 7 48235485 48238067 Vra5g0090 5 731365 734201 PCT