Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g2795 ATGAAGCTGTTTGGTTTCACCTTCAACTTGAAGGCTGCCATAGCCCGTGAAGATGGTCCAAAGAGGTTCCACTGCCGGTACTGTCGCCGCCAATTCACAAATTCTCAAGCACTTGGAGGACACCAAAATGCGCACAGGAGGGAACGTGCCAAGCTAGCCCAGTTCAAATACCTTCTCAATCTTCGACAACAACATGGCCATAGGTTCAAAGAACCATACAACAACGTACCAAAAGGATGTTTGGTTCCTCATCCAAATGCCTCACCCAACGTCAGTGTTGGTAGTGCAACTAGTGCAGCTTTGTTTCAATTTCATGGTGCAGGGACGCTGCTCCTGCAAGTTCCAGCGCGTGACCATGACGTGGATGTGGATCTCAACCTCAGACTCTAG 390 0.4923 MKLFGFTFNLKAAIAREDGPKRFHCRYCRRQFTNSQALGGHQNAHRRERAKLAQFKYLLNLRQQHGHRFKEPYNNVPKGCLVPHPNASPNVSVGSATSAALFQFHGAGTLLLQVPARDHDVDVDLNLRL* 130
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g2795 129 PANTHER ZINC FINGER PROTEIN 5 1 129 IPR044299 GO:0010090
Vra7g2795 129 ProSitePatterns Zinc finger C2H2 type domain signature. 25 45 IPR013087 -
Vra7g2795 129 ProSiteProfiles Zinc finger C2H2 type domain profile. 23 50 IPR013087 -
Vra7g2795 129 Gene3D Classic Zinc Finger 8 74 - -
Vra7g2795 129 PANTHER ZINC FINGER PROTEIN 8-LIKE 1 129 - -
Vra7g2795 129 SUPERFAMILY beta-beta-alpha zinc fingers 19 50 IPR036236 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra7g2795 Vra-Chr7 48199612 48200001 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra7g2795 1 55 C2H2 Transcription Factor Family AT5G06650 42.029 4.53e-11 55.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra7g2795 - - vra:106766530 271.166