Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g2794 ATGAGAGTTCAAAAAGAAGGAGCAAAAGATGAAGGTGGCTTTTTCCACATGTTTGACTGGACCTCAAAATCACGGAAGAAATTATTTTCAACCACGCCGGAGTCCTTGAAACAAAGAAGAAAAGTTGATGGCAACTTGGCAACGATGCTTCCCTATCTGGTGGACGAAGATGATGAAATTGGAATAGGGGGAAGTATTAGAGATAGTGGTGACCATAGCTGTGCTACATCTGTTATAGATTCTGAAGCATGTGGAACCAGGGCCCCTGGTGTAGTTGCCAGGCTTATGGGATTGGATTCATTGCCGTCTTCTAGTTTTTCTGATCCATATTCTACCCCATATTTTGACAGCCAATGCATTCAAGATGTGCAGTACTGGAGGAAAAATCTCAATCATCTTCATGATCATCAGATTCTATATTCTGGAAAGTTGGTTGAAAAAGCTGAGGGAACCTCTAGGAACTTCATGGAGAAGCCTCTACAGACCCGTAGCAGGCCCATTGAAAAGTTTCAAACAGAAGTAATGCCTCCCAAATCAGCTAAATCTATTCCCCTTACTCACCATAAACTTTTGTCCCCAATTAAGAATCCTGGCTTTGTTCCATCAAATAATGCCACATACATAATGGAAGCTGCAGCAAGAATTATTGAACCTGGACGCCAAGCTGCTACAAAGGCTAAAGCACCTCTGGTAACATCATCAACAGTATCATTGAGGGTCAGAGACCTTAAAGAAAAAGTGGAGGCTTCACAAAAGGGACAACTAATTAGTTCATCTTCAGAGACCTCTAGAGTTAGAGATACAAAAGGAAAAAGAGAAACCCCTCTTAGAACTAGTAGGCTTTCTGAAACTTCTCATAGGTTGACTGAGTCTAACGATGCCAAATATCTAAAAGGAGAATCTTTGAACAAAAGTTGGAATGGAGTTGTGGATACACCTATCAGATCATCTACTCAAGTAGATGAACATTGTTATTCAAAAAATAAAGGGAAATCTATATCACTTGCAATCCAAGCAAAAGTGAATGTTCAAAGAAGGGAAGGCTTGAGTTTTAGTAGTGGAAAAAGCTTAGTGGAGCAGAGAGAGCAATGTGACACTAAAAACTCCCAGAAGCCTCTGAAGGCTAATGTTCAAAAAGGTCTGCACATGAAATCCTCTGGTCAAGATGCTTCTGGTGTTCTCAGGCAGAATAATCAGAAACAGAATTGTCCAATGGATAAAGACAAACTACCATCAAAGCCATTGGTTTCCAATTCACAAGGTAGAAAAGTTGTCACTGGGGATTCTTCTAGTGGACGACATAGAAGCTCTAGTAATAAATCCGTTGCAAAATCTAAAGCTGGGCCCAAAAAACCATCAACGAGTGTTTCAGACAGTGAAAAGGAAGTCTTGTATACTCGTACAAACAATTTCCCAAGGAAGAAGAGGTCTACAGACAGGGACTGGAATGATAGGGTTGTTGATAATTTATTCATCGACAAATCACAGAAGCCTGTTCAGTCTAATGTAGTTAGTAATAAATACCATGGTGAGGCTGAAGAAGTAAAAAAGAAAGACATGGATGTAGTTTCCTTCACATTTACCATGCCCTTGACAAGAAACAATTCTGGTTTTGAGACATCTGGCCTAAATTCCTTGGATCAGCATATTAGAAGAGTGTTGGTTGATACTGAAACTGATAATGCAAGGTCTCCTGTAGGATACAGTGCAGTTGGTGGTGATGCCTTGGGTATTCTTTTGGATCAGAAGTTGAGGGAGTTAACATATGGAATTGGGAACTCTTGTGATGACTCTCTCAAAGCAAGGTCACCCTCCAGCACTGCACCAAAAGTTGCAGGGTCACCCACCCTTAATTCACTTAACCTCTTTCCAGTGTTGCAACAGAAGAAAGATCAAGACATGATGTCGACTGATAAATTATTCAGTAACCGCACCTGTCTTCCAGAACTATCATCCCAGCATAGGCTTCGGCTTGATAAGATGGAGGAGTGTGAGATGAATCCTATGGAAGCAGGGTTATTCAGTTCAGGACAGCCGAGTCCAATATCTGTTCTTGATCCTTCTTTTTCCACTGAAAGCTGTGAATCTCCATTCAGCGCGAATGCTTCCAGTTCTGAAGACCAAAAAAGGAGGAAGCAAGTTGTGGGCTCAGGAAATGGCTATAGAGACTTGTTTGATTCAGCATCAGCTTGGACCATGCTAAGGAAACAATCAAGTACATGTTCCCAAATGAAGATTGGACAATCAAGCACATGGGAGTTAGAGTATGTAAATGATATATTGTGTAATGTGGAGTTGATGTACATGGACTTTTCTCTTGGCAGAGCTCGTGAGATTGTGAACCCTCATCTGTTCAACCAGTTGGAAAATCGAAGGGGAAGGTTAGAGAGTGATGGTGGTGAGTGCAGAATAAGAAGGAAAGTTATATTTGATTGTGTGAGTGAGTGCTTGGACTTGAGATGCAGGCGTTATGTTGGTGGAGGTTACAAAATGTGGGCAAAAGGGGTTGCAATGGTGAGAAGAAATGAATGGTTGGCAAAGGAAGTGTGGAAGGAAATTTCAAGTTGGAGAGATATGGGGGACTCAATGGTGGATGAACTGGTAGATAGGGACATGAGCATCCAATATGGACAATGGCTAGATTTTGAGGTTGATACTTTTCAACTTGGTGCAGTGCTTGAAGACCAAATATTTGATTCTTTGGTTGATGACTTCGTTGCAGAAATCCTGCAACTGTAA 2739 0.4122 MRVQKEGAKDEGGFFHMFDWTSKSRKKLFSTTPESLKQRRKVDGNLATMLPYLVDEDDEIGIGGSIRDSGDHSCATSVIDSEACGTRAPGVVARLMGLDSLPSSSFSDPYSTPYFDSQCIQDVQYWRKNLNHLHDHQILYSGKLVEKAEGTSRNFMEKPLQTRSRPIEKFQTEVMPPKSAKSIPLTHHKLLSPIKNPGFVPSNNATYIMEAAARIIEPGRQAATKAKAPLVTSSTVSLRVRDLKEKVEASQKGQLISSSSETSRVRDTKGKRETPLRTSRLSETSHRLTESNDAKYLKGESLNKSWNGVVDTPIRSSTQVDEHCYSKNKGKSISLAIQAKVNVQRREGLSFSSGKSLVEQREQCDTKNSQKPLKANVQKGLHMKSSGQDASGVLRQNNQKQNCPMDKDKLPSKPLVSNSQGRKVVTGDSSSGRHRSSSNKSVAKSKAGPKKPSTSVSDSEKEVLYTRTNNFPRKKRSTDRDWNDRVVDNLFIDKSQKPVQSNVVSNKYHGEAEEVKKKDMDVVSFTFTMPLTRNNSGFETSGLNSLDQHIRRVLVDTETDNARSPVGYSAVGGDALGILLDQKLRELTYGIGNSCDDSLKARSPSSTAPKVAGSPTLNSLNLFPVLQQKKDQDMMSTDKLFSNRTCLPELSSQHRLRLDKMEECEMNPMEAGLFSSGQPSPISVLDPSFSTESCESPFSANASSSEDQKRRKQVVGSGNGYRDLFDSASAWTMLRKQSSTCSQMKIGQSSTWELEYVNDILCNVELMYMDFSLGRAREIVNPHLFNQLENRRGRLESDGGECRIRRKVIFDCVSECLDLRCRRYVGGGYKMWAKGVAMVRRNEWLAKEVWKEISSWRDMGDSMVDELVDRDMSIQYGQWLDFEVDTFQLGAVLEDQIFDSLVDDFVAEILQL* 913
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g2794 912 Pfam Domain of unknown function (DUF4378) 753 904 IPR025486 -
Vra7g2794 912 PANTHER PHOSPHATIDYLINOSITOL N-ACETYLGLUCOSAMINYLTRANSFERASE SUBUNIT P DOWN SYNDROME CRITICAL REGION PROTEIN 5 -RELATED 1 910 - -
Vra7g2794 912 PANTHER EXPRESSED PROTEIN 1 910 - -
Vra7g2794 912 MobiDBLite consensus disorder prediction 247 291 - -
Vra7g2794 912 MobiDBLite consensus disorder prediction 413 466 - -
Vra7g2794 912 MobiDBLite consensus disorder prediction 685 715 - -
Vra7g2794 912 MobiDBLite consensus disorder prediction 685 704 - -
Vra7g2794 912 MobiDBLite consensus disorder prediction 399 479 - -
Vra7g2794 912 MobiDBLite consensus disorder prediction 346 373 - -
Vra7g2794 912 Pfam DUF761-associated sequence motif 77 107 IPR032795 -
Vra7g2794 912 MobiDBLite consensus disorder prediction 264 291 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra7g2794 Vra-Chr7 48190672 48195815 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra7g2794 6 910 TRM (TON1 Recruiting Motif) Superfamily AT3G58650 30.193 1.13e-93 312
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra7g2794 - - gmx:102660038 1370.14
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra7g2794 7 48190672 48195815 Vra7g2794 7 48190672 48195815 ECH
Vra7g2794 7 48190672 48195815 Vra5g0085 5 688054 693195 PCT