Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g2787 ATGGCAAAGTCGAAGAACCACACTGCTCACAACCAGTCCTACAAGGCCCACAAGAATGGCATCAAAAAGCCAAAGAGGCATCGCCACACTTCCACCAAAGGGATGGATCCCAAGTTTTTGAGGAACCAGAGGTACGCGAGGAAGCATAACAAGAAGAGCGGTGAAACAGCCTCTGAGGAAGAGTAA 186 0.4946 MAKSKNHTAHNQSYKAHKNGIKKPKRHRHTSTKGMDPKFLRNQRYARKHNKKSGETASEEE* 62
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g2787 61 MobiDBLite consensus disorder prediction 1 32 - -
Vra7g2787 61 Gene3D - 1 61 - -
Vra7g2787 61 PANTHER 60S RIBOSOMAL PROTEIN L29 1 61 IPR002673 GO:0003735|GO:0005840|GO:0006412
Vra7g2787 61 Pfam Ribosomal L29e protein family 3 42 IPR002673 GO:0003735|GO:0005840|GO:0006412
Vra7g2787 61 PANTHER 60S RIBOSOMAL PROTEIN L29 1 61 - -
Vra7g2787 61 MobiDBLite consensus disorder prediction 1 61 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra7g2787 Vra-Chr7 48135338 48136106 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra7g2787 1 61 Cytoplasmic Ribosomal Protein Gene Family AT3G06700 86.885 2.41e-34 109
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra7g2787 7 48135338 48136106 Vra5g0077 5 607374 608166 PCT