Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g2774 ATGGTTGACACTTTCAGTGTAGAGAGTAGGCTTCATATAAGAGAGTTTGATGAAGGTAGAGATGTTAAGGTGGTGGGGAAGCTTGAGAGGAAGTGTGAGATTGGGACTAAAAAGGGGGTCTCCATTTTCACCAACATGATGGCTGACCCTTCATCTAGGATTAGGTTCTATCCCCTTCATGTTATGTTGGTGGCTGAGCTGCTTGAAAGCAAGGAGCTTGTGGGTGTGGTTCGAGGGTGCATTAAGAGTTTGAGAACTCCTTCTGAATCATTGCTGAAGATTGGTTGCATACTAGGCCTTAGGGTCTCTCCTTCACACAGGAGAAAGGGGATTGGACTGAAACTTGTCACCTCGGTTGAAGAATGGATGCTGAGAAATGGGGCTGAATATGCATTCTTGGCAACTGAAAAGAACAACGATGCCTCTAGAAACCTATTTACCAACAAATGCAAATATGTGAGCCTCAGCTCACTTTTCATATTTGTGCATCCAATTAGTTTCCCTGCAAAACAGATTTCCAAGGATATAGAAATTGAGAAGGTAAACATAGACCAGGCAATTTCCTTATACAGAAGAACCCTGATGGCCAAAGAGCTTTACCCATTAGACATGGATAGTATTTTGAAGGAGAATCTCAGCTTGGGCACCTGGGTGAGTTATTACAAAGAGGGAGGCTTACTCAACTTGCAGAGAAAGGAAGAGAGTGAAGACATTATTACCAATGAAATCACAAGCTCATGGATCATCTTTAGCATATGGAATACTTGTGAGGCTTACAAGCTTCAACTTAAAAAGTCTCAGCCACTTAGGTTTCTTCACACAACTTTAAATCATGCAAGAGACAAAATCTTCCCTTGTCTGAGAATGTCGGTGAGTGACTCACTGTGCAGGCCCCTTGGGTTTCTCTTCCTCTATGGGCTCCACGGAGAGGGAGAGAACCTTGGGGAGCTAATGGAGTCCATATGGAGATTCACATCAAGGATGGGAGAAAGTTTGAAGGACTGCACAGTGGTTATAACGGAGCTAGGGTTTGGTGATCCACTTGTAAACCATATCCCTCAAACAGCTTCCATGTCGTGTATCGATGATATTTGGTACACGAAAAGAATTTCAAGCCACAGTGACGAAAAGGATGATGAACTGCTGATTAAGAGACAAATCGGGAATGTGTTTGTTGACCCTAGAGATTTTTAG 1194 0.4305 MVDTFSVESRLHIREFDEGRDVKVVGKLERKCEIGTKKGVSIFTNMMADPSSRIRFYPLHVMLVAELLESKELVGVVRGCIKSLRTPSESLLKIGCILGLRVSPSHRRKGIGLKLVTSVEEWMLRNGAEYAFLATEKNNDASRNLFTNKCKYVSLSSLFIFVHPISFPAKQISKDIEIEKVNIDQAISLYRRTLMAKELYPLDMDSILKENLSLGTWVSYYKEGGLLNLQRKEESEDIITNEITSSWIIFSIWNTCEAYKLQLKKSQPLRFLHTTLNHARDKIFPCLRMSVSDSLCRPLGFLFLYGLHGEGENLGELMESIWRFTSRMGESLKDCTVVITELGFGDPLVNHIPQTASMSCIDDIWYTKRISSHSDEKDDELLIKRQIGNVFVDPRDF* 398
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g2774 397 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 9 147 IPR016181 -
Vra7g2774 397 Pfam Acetyltransferase (GNAT) family 64 150 IPR000182 GO:0016407
Vra7g2774 397 CDD NAT_SF 62 133 - -
Vra7g2774 397 PANTHER ACYL-COA N-ACYLTRANSFERASES (NAT) SUPERFAMILY PROTEIN 3 397 - -
Vra7g2774 397 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 11 233 IPR000182 GO:0016407
Vra7g2774 397 Gene3D - 12 162 - -
Vra7g2774 397 PANTHER N-ACETYLTRANSFERASE HLS1-LIKE ISOFORM X1-RELATED 3 397 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra7g2774 Vra-Chr7 47988551 47990318 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Vra7g2774 Acetyltransf_1 1.3e-14 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra7g2774 - - gmx:100814448 696.427
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra7g2774 7 47988551 47990318 Vra7g2774 7 47988551 47990318 ECH