Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g2763 ATGCTCCTGGCATTGATGAATCTGTTCTCGCTGTGTTGGAAGCCGTTCGGGCGCGATGCTGATCGATACGATTCCATCGGAGTTATCGGGAGCAACTTCGCCGGGAGAGAAGGCAGAGAAGGCTTGCTCTGGTTCCGCGACGTTGGAAAATATGCCTCCGGTGATTTCTCCATGGCCGTAGTTCAGGCCAACCAGGTTCTTGAAGACCAGAGCCAGATCGAGTCCGGTCCTCTCGGCACTTTCGTCGGCATATACGACGGTCACGGAGGACCCGACGCCTCCAGATATGTATGCGATCACTTGTTTCGCCATTTTCAAGCAACGTCAGCTGAGTCACACGGGCTTGTTACAGCGGAAACAATAGAAAGAGCATTTCGCCAGACGGAAGATGGATACACAGCCCTCGTGTCAAGTACCTGGAATGCTCGACCTCAAATTGCGAGTGCTGGTACCTGTTGTCTTGTTGGAGTGATATTTCAACAGACACTCTTTGTGGCAAACGTTGGAGATTCCCGTGTTGTATTGGGTAAGAAAGTTGGCAATACTGGAGGTATGGCTGCAATTCAGCTGTCTACAGAACACAATGCAAATCTTGAGGCTGTTAGACAGGAACTTAAAGAATCACACCCTCATGATCCTCAAATTGTGGTCCTCAAACATGGAGTGTGGAGAGTAAAAGGGATTATTCAGGTTTCTAGATCTATAGGTGACGTATATTTGAAACATCCACAATTTAACCGGGAACCACTTAATGCAAAATTCAGACTTCCTGAACCGATGCACATGCCTATCATGAGTGCTAATCCCAGTATTCTTTCTCATCCTCTCCAACCAAATGATTCCTTCCTTATATTTGCATCAGATGGTTTATGGGAGCACTTGAGTAATGAGAAAGCTGTGGATATTGTAAACAGCAATCCACATGCGGGTAGTGCGAAGAGACTTATCAAGGCTGCCCTCCACGAAGCAGCAAGAAAACGAGAAATGCGGTATTCGGATCTGCGTAAGATTGACAAGAAGAGGCACAGTGCTAGACTCGGCACTTTCACTTCGAAGCGCTCTCGATCACTGACGTGTATCATTGTAAGCAGTAAGCAGTCTTGTACGAGTTTTTCCCATAACTGA 1125 0.472 MLLALMNLFSLCWKPFGRDADRYDSIGVIGSNFAGREGREGLLWFRDVGKYASGDFSMAVVQANQVLEDQSQIESGPLGTFVGIYDGHGGPDASRYVCDHLFRHFQATSAESHGLVTAETIERAFRQTEDGYTALVSSTWNARPQIASAGTCCLVGVIFQQTLFVANVGDSRVVLGKKVGNTGGMAAIQLSTEHNANLEAVRQELKESHPHDPQIVVLKHGVWRVKGIIQVSRSIGDVYLKHPQFNREPLNAKFRLPEPMHMPIMSANPSILSHPLQPNDSFLIFASDGLWEHLSNEKAVDIVNSNPHAGSAKRLIKAALHEAARKREMRYSDLRKIDKKRHSARLGTFTSKRSRSLTCIIVSSKQSCTSFSHN* 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g2763 374 SUPERFAMILY PP2C-like 65 321 IPR036457 -
Vra7g2763 374 SMART PP2C_4 42 362 IPR001932 -
Vra7g2763 374 Pfam Protein phosphatase 2C 79 326 IPR001932 -
Vra7g2763 374 ProSiteProfiles PPM-type phosphatase domain profile. 55 364 IPR001932 -
Vra7g2763 374 PANTHER ALPHABET, ISOFORM E-RELATED 3 350 - -
Vra7g2763 374 ProSitePatterns PPM-type phosphatase domain signature. 81 89 IPR000222 GO:0043169
Vra7g2763 374 CDD PP2Cc 56 327 IPR001932 -
Vra7g2763 374 Gene3D - 47 348 IPR036457 -
Vra7g2763 374 PANTHER PROTEIN PHOSPHATASE 2C 42-RELATED 3 350 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra7g2763 Vra-Chr7 47906824 47910425 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra7g2763 4 309 PP2C-type Phosphatase Gene Family AT3G17090 68.932 4.15e-157 442
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra7g2763 K01102 - gmx:100790813 630.172
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra7g2763 7 47906824 47910425 Vra7g2763 7 47906824 47910425 ECH
Vra7g2763 7 47906824 47910425 Vra10g0767 10 13718677 13726402 PCT