Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g2759 ATGGCATCATCGTCAATGATCACAAACCCGCCAACAGCGAGCACGGAGCGGTCACGTGACGCCAAGAGAAGAAAGAAGAAGAAAACACAGGAAAGAGAGGACGAGAAGCAGCCCAGGTGGAAATCCCAAGCGCAGCAACAAATCTACTCCTCCAAGCTGCGCCAAGCCTTAGCCAGAGTCAACCTCGGCTCCGCGTCGCCAAAAGGCAAAGCCGTGCGCGAAGCCGCCGACAGAGTCCTGGCCGTGACGGCCAAGGGAAGGACGCGCTGGAGCCGAGCCATCCTCACCAACAGGCTCAAGCTCAAGTTCACGAAACACAAGAGACAGAGAGTGGCGGCGACGTCCCCTGGCCGGTCAAAGAGGGCTCGCGTGAGCGTTCACCGGCTGAAGGCGAAGGGTGGAGCGAGTGTGCAGAGGAAAGTTAGGTTCCTGGGACGGTTGGTTCCCGGTTGCCGGAAAGAACCGTTACCGGTTGTTCTGGAAGAAGCCATCGATTACATACCCGCGCTTGAGATGCAGGTTCGAGCCATGAACGCTCTCTTTAACCTTCTCTCCGCCGCTTCTTCTTCTTCTTCGTCTTCTTCTTCTTCCTCATAA 597 0.5678 MASSSMITNPPTASTERSRDAKRRKKKKTQEREDEKQPRWKSQAQQQIYSSKLRQALARVNLGSASPKGKAVREAADRVLAVTAKGRTRWSRAILTNRLKLKFTKHKRQRVAATSPGRSKRARVSVHRLKAKGGASVQRKVRFLGRLVPGCRKEPLPVVLEEAIDYIPALEMQVRAMNALFNLLSAASSSSSSSSSSS* 199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g2759 198 MobiDBLite consensus disorder prediction 1 48 - -
Vra7g2759 198 PANTHER MYC-TYPE, BASIC HELIX-LOOP-HELIX (BHLH) DOMAIN-CONTAINING PROTEIN-RELATED 9 197 - -
Vra7g2759 198 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 140 187 IPR036638 GO:0046983
Vra7g2759 198 MobiDBLite consensus disorder prediction 1 15 - -
Vra7g2759 198 CDD bHLH_AtIBH1_like 128 180 IPR044549 GO:0006355
Vra7g2759 198 PANTHER TRANSCRIPTION FACTOR IBH1-LIKE 1 9 197 IPR044660 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra7g2759 Vra-Chr7 47865037 47866535 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra7g2759 35 190 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G06590 54.286 6.01e-50 159
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra7g2759 - - gmx:100803765 258.84
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra7g2759 7 47865037 47866535 Vra7g2759 7 47865037 47866535 ECH
Vra7g2759 7 47865037 47866535 Vra10g0762 10 13693152 13694332 PCT