Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g2758 ATGGAGGAGAAGAGAGAGAAAGAAGCGAACTCAAAGTCATCATCCACCATGGCAAATTCTGTGGCATTTTCCGACGAGATTCCCAACATGACCATGACCATGTCCTTCCCTTTCTCCCCTGCTTTCTCCACCATCTTCGACATCATGCCACCTCTTCCTCCACCACCATCTTCATCCTTGCCTCACGATCCAAAAGCTTCAAACTTTCCCTTCATGGACTTGCTGGCTGTCCCTGATTATACCCCTTCCTTATTCGACTGGCCCCAAAACACCGCCGTCACCTCACCACCACCGCCACCAGCCCCCACCCAAATCACCCACGCGCTTCCCTCCCCGGCCAGCTCCAATGTCCCCGACGGCTCCGAGGTCCTCAACACTCCTCCGTCTCCCAACTACTCCTCGATTTCCTCCTCCTCGAATGAGGCCGCAGCGGCCGCCGCCAACAAAGCAACTGGAAATGAAGACGAAGCGGAGGAGGATGAAACGGCAACAGATGCAGCAGGAAAAGGAGAAGACCAAGATCAAGACAAGTCTAAGAATCAGCCGAAGCCGAAAAAGAAGCACCAAAAGAAGCCAAGAGAACCAAGATTTGCGTTCAAAACAAAGAGTGAAGTGGATCACCTCGACGATGGCTATAGGTGGCGCAAGTACGGTCAGAAAGCCGTCAAAAACAGCCCTCATCCCAGGAGCTACTATCGTTGCACCACCGCGGCATGCGGCGTGAAGAAGCGCGTGGAGCGTTCCTCGGAGGACCCTACGGTGGTGGTGACAACCTACGAGGGGCAACATACGCACCCTTGTCCTGCCACTTCACGGGCTAGCCTCGGGTTCTTGCACTCCGAACCAAGTGCGTTCGGACCCACCACCGGACTCTTCATGCTGCAACAACAACAGCACCAACAGTTTCGTCATGACCAAGCACAAGCACAAGCACAAGCTCAAGCTCAAGCTCAAGTAGCAATGTTATACAACTCCACAACCACCAGCACCTCGTCTTCATCATCACCTCTGAATGTTGTTAACTCAGCTACTTGCGTAAACGACTACGTCAATACGTCGTCGTTGAGTGGGTTCCTTCAGAGCCAAGAGAATCTGCGAGGTTTTGCGCTATCTAGGGTGGGAGGTCCTCAGGATTTCTTCAATGGGCTTCTTCAGGACATGGTGCCAACGCAGATGATGAGTGAAGAGAGGGGAGATCGTGTCTAG 1206 0.5323 MEEKREKEANSKSSSTMANSVAFSDEIPNMTMTMSFPFSPAFSTIFDIMPPLPPPPSSSLPHDPKASNFPFMDLLAVPDYTPSLFDWPQNTAVTSPPPPPAPTQITHALPSPASSNVPDGSEVLNTPPSPNYSSISSSSNEAAAAAANKATGNEDEAEEDETATDAAGKGEDQDQDKSKNQPKPKKKHQKKPREPRFAFKTKSEVDHLDDGYRWRKYGQKAVKNSPHPRSYYRCTTAACGVKKRVERSSEDPTVVVTTYEGQHTHPCPATSRASLGFLHSEPSAFGPTTGLFMLQQQQHQQFRHDQAQAQAQAQAQAQVAMLYNSTTTSTSSSSSPLNVVNSATCVNDYVNTSSLSGFLQSQENLRGFALSRVGGPQDFFNGLLQDMVPTQMMSEERGDRV* 402
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g2758 401 ProSiteProfiles WRKY domain profile. 203 268 IPR003657 GO:0003700|GO:0006355|GO:0043565
Vra7g2758 401 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 68 387 IPR044810 GO:0003700
Vra7g2758 401 MobiDBLite consensus disorder prediction 82 204 - -
Vra7g2758 401 MobiDBLite consensus disorder prediction 107 146 - -
Vra7g2758 401 Pfam WRKY DNA -binding domain 209 266 IPR003657 GO:0003700|GO:0006355|GO:0043565
Vra7g2758 401 MobiDBLite consensus disorder prediction 163 181 - -
Vra7g2758 401 MobiDBLite consensus disorder prediction 92 106 - -
Vra7g2758 401 SUPERFAMILY WRKY DNA-binding domain 201 268 IPR036576 GO:0003700|GO:0006355|GO:0043565
Vra7g2758 401 PANTHER WRKY TRANSCRIPTION FACTOR 48-RELATED 68 387 - -
Vra7g2758 401 Gene3D WRKY domain 194 269 IPR036576 GO:0003700|GO:0006355|GO:0043565
Vra7g2758 401 SMART WRKY_cls 208 267 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra7g2758 Vra-Chr7 47837200 47839496 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra7g2758 13 395 WRKY Transcription Factor Family AT5G49520 38.404 7.08e-50 171
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Vra7g2758 WRKY 2.1e-26 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra7g2758 - - gmx:100808190 462.611
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra7g2758 7 47837200 47839496 Vra7g2758 7 47837200 47839496 ECH
Vra10g0760 10 13651211 13654177 Vra7g2758 7 47837200 47839496 PCT