Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g2746 ATGGTTTGGCGAAAGATGTCCCTTTTGAAGATGAAAATCATCAATGTTATTCTCATTCTCCCTTTCCTATGTTTGTATGTTTTGAGTACTTTGTTCATTAAAGCATCAGCAGTAAATGCAGCATATGAGTCTGATAGAATAATCGATCTTCCTGGTCAACCTTCAACCCCTTCAATCTCACACTTTTCAGGTTACATAACTGTCAATGAAAACCATGGAAGGGCCCTTTTCTACTGGTTCTTTGAAGCTCAGTCTCAACCCTCCAACAAGCCTCTTCTTCTCTGGCTCAATGGAGGACCTGGATGCTCCTCTGTTGGCTATGGTGCCGTTGTTGAGATTGGACCTCTTTTAGTCAGCAAAAACGGGGAAGGACTACATTTCAACACATATTCCTGGAATCAAGAAGCAAATTTGTTGTTTGTTGAATCCCCTGTTGGAGTTGGATTTTCTTATACCAACACCTCTTCTGACACCATCTTAGAGGATAACTTAGTAGCTGAGGATGCCTACAATTTCTTGGTGAATTGGCTACAAAGATTCCCTCAGTTCAAATCCCGGGACTTTTTTATATCAGGAGAAAGCTACGGTGGTCACTATATCCCTCAGCTTGCAGAGTTAATCTTTGATCGAAACAGAGATAGCAACAAATACCCTTTTATCAATCTTAAAGGTTTTATTGTAGGTAACCCAGAGACTGATGATTACTATGACTACAAAGGCCTTCTGGAATATGCATGGAGCCACGCAGTTATATCAGATCAGCAATATGAGAAAGCAAAACAAGTATGCGATTTTAAACAATTTGAATGGTCCAATGAATGCAACAAGGCCATGAACGAAGTCTTCCGAGATTACTCAGAAATTGACATATACAACATTTATGCCCCGGCATGTCTTTCAAACAGTACATCCTCAATGGCTGGTGATAGCAACAGTGACGGCCCTGAATCATTTACCAAGGTGAGAAATTATCATAGAGAAGGAAGGATGAGAATTTTTGGGGGCTATGACCCTTGTTATTCCAATTATGCAGAAGAGTATTTCAACAGAAAAGATGTTCAATCAGCATTTCATGCAGACACTAAAAGAGCCACTAACGTAGCATGGAAGGTTTGCAATAATTCCATATTGAGGGCTTACAACTTCTCTGTGTTCTCGGTGCTACCCATCTACACCAAACTCATCAAGGGTGGGCTTAAGATATGGATATACAGTGGAGACGCAGATGGAAGAGTGCCAGTAATAGGGACAAGATATTGCGTTGAGGCTCTTGGATTACCTCTCAAATCTAGGTGGCGAACTTGGTACCATGATAATCAGGTTGGAGGAAGAACAGTAGAATATGAAGGATTGACGTATGTGACAGTGAGAGGAGCTGGTCACTTGGTGCCATTGAACAAGCCTAGTGAAGGTCTCACTCTTATTAATTACTTCTTAAAAGGAGACCATCTTCCTACTCCTGGATAA 1467 0.4097 MVWRKMSLLKMKIINVILILPFLCLYVLSTLFIKASAVNAAYESDRIIDLPGQPSTPSISHFSGYITVNENHGRALFYWFFEAQSQPSNKPLLLWLNGGPGCSSVGYGAVVEIGPLLVSKNGEGLHFNTYSWNQEANLLFVESPVGVGFSYTNTSSDTILEDNLVAEDAYNFLVNWLQRFPQFKSRDFFISGESYGGHYIPQLAELIFDRNRDSNKYPFINLKGFIVGNPETDDYYDYKGLLEYAWSHAVISDQQYEKAKQVCDFKQFEWSNECNKAMNEVFRDYSEIDIYNIYAPACLSNSTSSMAGDSNSDGPESFTKVRNYHREGRMRIFGGYDPCYSNYAEEYFNRKDVQSAFHADTKRATNVAWKVCNNSILRAYNFSVFSVLPIYTKLIKGGLKIWIYSGDADGRVPVIGTRYCVEALGLPLKSRWRTWYHDNQVGGRTVEYEGLTYVTVRGAGHLVPLNKPSEGLTLINYFLKGDHLPTPG* 489
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g2746 488 Gene3D - 387 481 - -
Vra7g2746 488 ProSitePatterns Serine carboxypeptidases, serine active site. 190 197 IPR018202 GO:0004185
Vra7g2746 488 PANTHER SERINE CARBOXYPEPTIDASE-LIKE 26 23 486 - -
Vra7g2746 488 Pfam Serine carboxypeptidase 51 481 IPR001563 GO:0004185|GO:0006508
Vra7g2746 488 ProSitePatterns Serine carboxypeptidases, histidine active site. 451 468 IPR033124 GO:0004185
Vra7g2746 488 Gene3D - 339 376 - -
Vra7g2746 488 Gene3D alpha/beta hydrolase 39 309 IPR029058 -
Vra7g2746 488 SUPERFAMILY alpha/beta-Hydrolases 44 485 IPR029058 -
Vra7g2746 488 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 23 486 IPR001563 GO:0004185|GO:0006508
Vra7g2746 488 PRINTS Carboxypeptidase C serine protease (S10) family signature 128 140 IPR001563 GO:0004185|GO:0006508
Vra7g2746 488 PRINTS Carboxypeptidase C serine protease (S10) family signature 141 151 IPR001563 GO:0004185|GO:0006508
Vra7g2746 488 PRINTS Carboxypeptidase C serine protease (S10) family signature 176 201 IPR001563 GO:0004185|GO:0006508
Vra7g2746 488 PRINTS Carboxypeptidase C serine protease (S10) family signature 451 464 IPR001563 GO:0004185|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra7g2746 Vra-Chr7 47748806 47751333 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra7g2746 340 484 Calmodulin-binding Proteins AT2G22960 29.452 7.45e-15 71.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra7g2746 K16297 - gmx:100815141 887.871
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra7g2746 7 47748806 47751333 Vra7g2746 7 47748806 47751333 ECH