Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g2716 ATGGCATCTGATCTAAGTTCGGGGCTGTCCAAGGAAACGTCTGTATTTGGGTTAAAAGCATGGGAACTAATGGGGATACTGGTTGGGTTGTTCATTGTAATCATTCTTGTGGTGGTATCGATATGTCTTACTTCACGAAAGAAATCCAGAAGAGTCAATGGCATGCTTCCCCTTAGCCATATGCTATCTGTTTCCGATGAAATCAAGGAAATTAGAGTTGATCAAGTTTCATCCAATAATCATCCTCAGAATGGAGCTTTTATGAGTCTGTATGACAGGTTTAGTGACAGAGACTCTGAAAAGGTTTTGATCCAACCAAAGAATGGGGAAAATAGCAGTCAATCGGGCTCATTCGTTCATCTTAAGAAAGATGATGGTGGCTCTCAATCAGGTGAAGAAAGTGGTGCCAAATCTGTTTCTACCTACAGGTCTTCTTCACATCCTATAACTGCACCATCTCCCTTGTCTGGTCTGCCTGAATTCTCTCACCTTGGATGGGGCCACTGGTTCACATTAAGGGACCTAGAACTTGCAACAAACAGGTTTTCCAAAGACAATGTTATTGGTGAAGGTGGATATGGAGTTGTTTATCAAGGCCAGTTAATTAATGGGAGCCCTGTGGCTGTTAAGAAGCTACTCAATAATCTAGGACAAGCTGAAAAGGAATTTAGAGTGGAAGTTGAGGCTATTGGCCATGTGCGACACAAGAATTTGGTTAGACTTTTGGGGTATTGCATTGAAGGGACTCACAGGTTGTTGGTTTATGAGTATGTTAACAATGGCAATTTAGAGCAATGGCTTCATGGAGCCATGAGGCAGTATGGTTTTCTTACTTGGGATGCTCGAATTAAAATTCTTCTTGGAACAGCTAAAGCGCTATCTTACTTGCACGAGGCAATTGAGCCAAAAGTTGTACATCGAGATATTAAATCAAGCAATATTCTAATTGATGATGATTTCAATGCAAAAATATCTGACTTTGGGCTGGCAAAGTTACTTGGTGCTGGAAAAAGTCATATCACAACTCGAGTAATGGGTACTTTTGGATATGTGGCTCCGGAATATGCCAATTCTGGCTTACTAAATGAGAAGAGTGATGTTTATAGCTTTGGGGTGTTGCTCCTCGAAGCAATCACAGGAAGGGACCCAGTGGATTATAGCCGACCAGCAGCTGAGGTAAATTTGGTTGACTGGCTCAAGATGATGGTTGGCAATAGGCGTGCAGAAGAGGTGGTAGACCCTAACATTGAGACCAGGCCTTCAACAAGTGCCCTTAAACGTGCCCTTTTGACTGCTTTGAGGTGTGTTGATCCAGATTCTGAGAAAAGACCAAAGATGAGTCAAGTTGTCCGCATGCTTGAATCAGAGGAATATCCCATACCCAGAGAGGATCGAAGACGCAGGAAGAGTCAAACGGGAAATATGGAGGTGGAGGCTCAGAAGGAGATTTCTGATACAGAGAAGAGTGACACTCCAGATTCGAAGTCCAATGGCAGAAGGAACCAAAAGAAGTAG 1515 0.4284 MASDLSSGLSKETSVFGLKAWELMGILVGLFIVIILVVVSICLTSRKKSRRVNGMLPLSHMLSVSDEIKEIRVDQVSSNNHPQNGAFMSLYDRFSDRDSEKVLIQPKNGENSSQSGSFVHLKKDDGGSQSGEESGAKSVSTYRSSSHPITAPSPLSGLPEFSHLGWGHWFTLRDLELATNRFSKDNVIGEGGYGVVYQGQLINGSPVAVKKLLNNLGQAEKEFRVEVEAIGHVRHKNLVRLLGYCIEGTHRLLVYEYVNNGNLEQWLHGAMRQYGFLTWDARIKILLGTAKALSYLHEAIEPKVVHRDIKSSNILIDDDFNAKISDFGLAKLLGAGKSHITTRVMGTFGYVAPEYANSGLLNEKSDVYSFGVLLLEAITGRDPVDYSRPAAEVNLVDWLKMMVGNRRAEEVVDPNIETRPSTSALKRALLTALRCVDPDSEKRPKMSQVVRMLESEEYPIPREDRRRRKSQTGNMEVEAQKEISDTEKSDTPDSKSNGRRNQKK* 505
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Vra7g2716 504 PANTHER OS01G0323000 PROTEIN 2 504 - -
Vra7g2716 504 PANTHER RECEPTOR-LIKE KINASE PLANT 2 504 - -
Vra7g2716 504 SUPERFAMILY Protein kinase-like (PK-like) 166 462 IPR011009 -
Vra7g2716 504 MobiDBLite consensus disorder prediction 131 151 - -
Vra7g2716 504 ProSiteProfiles Protein kinase domain profile. 182 459 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vra7g2716 504 ProSitePatterns Serine/Threonine protein kinases active-site signature. 304 316 IPR008271 GO:0004672|GO:0006468
Vra7g2716 504 MobiDBLite consensus disorder prediction 453 504 - -
Vra7g2716 504 MobiDBLite consensus disorder prediction 105 151 - -
Vra7g2716 504 SMART serkin_6 182 453 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vra7g2716 504 MobiDBLite consensus disorder prediction 105 119 - -
Vra7g2716 504 Pfam Protein kinase domain 183 451 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vra7g2716 504 CDD STKc_IRAK 188 454 - -
Vra7g2716 504 ProSitePatterns Protein kinases ATP-binding region signature. 188 211 IPR017441 GO:0005524
Vra7g2716 504 Gene3D Phosphorylase Kinase; domain 1 163 257 - -
Vra7g2716 504 Gene3D Transferase(Phosphotransferase) domain 1 258 470 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Vra7g2716 Vra-Chr7 47373423 47377958 Dispersed/Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra7g2716 17 456 Trihelix Transcription Factor Family AT1G70460 40.000 5.99e-95 301
       

Transcription factors information


Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-V Vra7g2716 Pkinase 9.3e-49 CL0016
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra7g2716 - - gmx:100793499 925.62
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra7g2716 7 47373423 47377958 Vra7g2716 7 47373423 47377958 ECH