Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g2710 ATGCGACTTGGGAAATACGAGTTGGGTAGGACTCTGGGTGAAGGCAATTTTGGCAAAGTCAGGTTCGCTAAGAACACAGATTCTGGTCAACCTTTTGCTGTTAAGATCATCGAGAAGAACAAGATCATCCACCTAAACATAACCAATCAGATAAAGAGGGAAATAGCCGCCTTAAAGCTCCTCAGACATCCCAACGTTGTTAGATTATACGAGGTCTTGGCTAGCAAAACAAAAATTTATATGATACTTGAATATGTGAATGGAGGAGAGCTATTTGGCATGATTGCATCCGAAGGTAAACGTTCAGAAAGTGAATGCAGAAAGCTGTTCCAACAGTTGATTGATGGGGTGAGCTACTGCCACACTAAAGGTGTCTTTCACAGGGATCTCAAGCTTGAGAATGTACTGGTAGATAACAAAGGAAACTTGAAAATAACTGATTTTGGTCTTAGTGCTTCACCCCAGCATCTCAGGGCAGATGGGTTGCTGCATACAACTTGTGGAAGTCCTAATTATGTTGCTCCTGAGGTTCTTGCTAATAGGGGCTATGACGGTGCAACATCAGATACATGGTCATGTGGTGTTCTATTATATGCAATCCTAACTGGACGTTTACCTTTTGATGACAGAAATATGGTAGTTCTCTATCAGAAGATTTTCAAAGGAGATATTCGGATACCAAAATGGCTATCACCAGGTGCACAAGACTTGATAAAGAGGATTCTTGATCCAAATCCTGAAAAACGGATAACAATGGCTGGGATCAAAGAAGATCCGTGGTTTAAGAAGGGTTATGTTCCAGCAAATGCTGAAGATGAGGATGTATATGTTGACAATGAAGCATTTTCCATGCATGAAGCAGAACAGAGGAATTCAGGATCATCACCAGCCATTATCAATGCATTTCAGTTGATAGGGATGTCTTCGTGCCTAGACCTCTCTGGCTTCTTTGAGAAAGAGGATGTCTCTGAGAGAAAGATAAGATTTACATCAAATCTTTCAGTTAAAGATCTGATTGAGAGGATTGAGGACACTGTGACAGATATGGAATTTATAGTCCAGAGGAAAAATGACAAATTGAAAGTAATTTGGGAGAACAAGGTGCACAAAACTACTGGATGCCTTTCAGTGGCAGTGGAGGTGTTTGAAATAAGCCCATCACTGTACGTGGTAGAATTAAGGAAGTCTTGTGGTGATACTTCTGTATATAAACAGTTATGCAATAAATTATTGGATGATTTGAGTGTTCCCCCAAGCAATCGCTTGTGA 1269 0.405 MRLGKYELGRTLGEGNFGKVRFAKNTDSGQPFAVKIIEKNKIIHLNITNQIKREIAALKLLRHPNVVRLYEVLASKTKIYMILEYVNGGELFGMIASEGKRSESECRKLFQQLIDGVSYCHTKGVFHRDLKLENVLVDNKGNLKITDFGLSASPQHLRADGLLHTTCGSPNYVAPEVLANRGYDGATSDTWSCGVLLYAILTGRLPFDDRNMVVLYQKIFKGDIRIPKWLSPGAQDLIKRILDPNPEKRITMAGIKEDPWFKKGYVPANAEDEDVYVDNEAFSMHEAEQRNSGSSPAIINAFQLIGMSSCLDLSGFFEKEDVSERKIRFTSNLSVKDLIERIEDTVTDMEFIVQRKNDKLKVIWENKVHKTTGCLSVAVEVFEISPSLYVVELRKSCGDTSVYKQLCNKLLDDLSVPPSNRL* 423
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g2710 422 ProSiteProfiles NAF domain profile. 294 318 IPR018451 GO:0007165
Vra7g2710 422 CDD CIPK_C 300 414 - -
Vra7g2710 422 SUPERFAMILY Protein kinase-like (PK-like) 3 269 IPR011009 -
Vra7g2710 422 PANTHER SERINE/THREONINE KINASE 3 420 - -
Vra7g2710 422 Gene3D Phosphorylase Kinase; domain 1 1 85 - -
Vra7g2710 422 ProSiteProfiles Protein kinase domain profile. 6 261 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vra7g2710 422 Gene3D Kinase associated domain 1, KA1 294 416 - -
Vra7g2710 422 ProSitePatterns Serine/Threonine protein kinases active-site signature. 125 137 IPR008271 GO:0004672|GO:0006468
Vra7g2710 422 PANTHER NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE 3 420 - -
Vra7g2710 422 Pfam Protein kinase domain 6 261 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vra7g2710 422 Pfam NAF domain 296 354 IPR004041 GO:0007165
Vra7g2710 422 SMART serkin_6 6 261 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vra7g2710 422 Gene3D Transferase(Phosphotransferase) domain 1 86 266 - -
Vra7g2710 422 ProSitePatterns Protein kinases ATP-binding region signature. 12 35 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra7g2710 Vra-Chr7 47335010 47339069 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra7g2710 69 414 CBL-interacting serine-threonine protein kinases AT3G17510 66.382 3.31e-163 461
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Vra7g2710 Pkinase 7.8e-74 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra7g2710 K07198 - gmx:100777468 734.561
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra7g2710 7 47335010 47339069 Vra7g2710 7 47335010 47339069 ECH