Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g2704 ATGTCAGAGGATATAGACTTGAATGGAGATTCTGAGAGGAAGCAAGATTTAAAGAGAAAGTCCAAAGATGAATCTGCCAAAACAATACCCTTATACAAACTTTTCTCATTTGCGGATTCTTTTGATCATTTATTGATGTTTGTGGGGACTGTGGGTGCTATCACCAATGGAATCTCCCCTCCCTTGATGACTTTGTTATTTGGAAATATGATCAATGCATTTGGAGGAACCAAAAACTCCAACGAAGTTGTTGTTGAAGTTTCCAAGGTGTCTTTGGAAATTGTATACTTGGCTGTGGGAACCTGTTTTGCATCACTTTTGCAGTTAACATGCTGGATGATCACTGGAGAGAGACAAGCTGCTAGAATTAGAGGATTATACCTTCAAACTATTTTGAGGCAAGATGTCACCTTCTTTGACAAGGAAACTAGAACAGGAGAGGTTGTTGGAAGGATGTCAGGTGATACTGTTCTTATTCAAGATGCCATGGGTGAAAAGGTAGGACAGTTCTTACAGTTATTGGCAACTTCCGTTGGAGGTTTTGTAATAGCATTCATCAGGGGATGGCTTCTAACTGTTGTCATGTTATCTTGTATTCCACTTATTGTTTTGGCTGGCGCCATGGTAAGCCTTGTTATTGCAAAAGCATCATCCAGGGGACAAGAAGCTTATTCCCTAGCTGCAACTGTAGTAGAGCAGACAATAGGTTCTATCCGAACCGTTGCATCATTCACTGGGGAGAAGCAAGCAATAGATAAATATAGTCAGTCCTTAATCAAAGCTTACAGGGCTGGAGTGAAAGAGGCACTAGCTTCTGGTTTTGGGTTTGGTTCTCTCTCTTTTGTTTCTACCTGCAGTTATGGTTTGGCAATATGGTTTGGTGCAAAAATGATAATAGAAAAAGGATATACAGGAGGAGAGGTTGTGACAGTAATGTTGGCTGTTTTGACTGGCTCTGCGTCTCTTGGGCAGGCATCTCCAAGCTTGAGCGCTTTTGCTGCTGGAAAAGCTGCTGCCTTTAAGATGTTTGAAACAATTAAGAGGAAGCCAGAAATCGATGCTTATGATACAACTGGTCGGCAGCTTGAAGACATCTGTGGACATATAGAACTAAGGGAGGTTTACTTTAGTTATCCTACAAGACCAGACGAACTTATATTCAATGGATTCTCTCTTTCAGTACCAAGTGGCACTACGACAGCTTTGGTTGGAGAAAGTGGGAGTGGGAAATCCACAGTTGTTAGTTTGATAGAGAGATTTTATGATCCACAGGCAGGTGAAGTTCTCATTGACAGTATCAACCTCAAAGAATTTCAACTGAAATGGATCAGACAGAAAATAGGCCTAGTTAGCCAGGAACCAGTTCTCTTTACCTGTAGTATTAAAGAGAATATTGCCTATGGCAAGGATGATGCAACTGTTGAAGAAATCAGAGCATCAGCAGAACTAGCTAATGCTGCCAAATTTATAAATAGACTTCCTCAGGGGCTGGACACAATGGTTGGTGAGCATGGAACTCAGCTTTCTGGGGGTCAAAAGCAAAGGGTTGCAATAGCAAGAGCGATTTTGAGAGACCCAAGAATCTTACTTCTGGATGAAGCTACAAGTTCACTTGATGTTGAGTCTGAGAAAATTGTACAGGAAGCACTGGACAGAATGATGATAAACCGAACAACAGTCATTGTAGCCCACCGTTTAAGTACCATAAGGAATGCTGATAGCATTGCTGTTATTCATCAAGGAAAAATAGTTGAAAAAGGTTCACATGCCGAACTCACCAATGATCTCAGTGGAGTCTATAGCCAGCTCATTAGACTGCAGGAAATTAAAGGGTCAGAACAAAATGCTTCATATGACACAGACAAGATAGAAAGTCCAGTGCTTTCTGGTAGACAATTAAGTCAAAGATCTTCCTTACGATCTATAAGCCAAAGGTCAGCAGGAGTTGGAAGCAGTGGTTGCAACTCTTTCTCCGAATCACATGTTCCCCCAACGATTAGCTTGGATCCTGCAGGCAGAGGATCTCAAGCACTTCCTGCAACAATTTCTTCACCACCGCAAGTGCCACTCTCTCGCCTGGCATATTTAAACAAGTCCGAGATTCCAGTGTTGTTTATAGGGACTCTAGCTGCAGTAGTAAGTGGATTATTAATACCAATTATTGCACTCTTCGTTTCCAAAATGATAAGTATTTTCTATGAGCCAGTTGATGAACTTCGGAAAGATTCAAAGCTTTGGGCATTACTATTTGTTGCAATTGGTGCGGTATCATTTATCACAGCTCCTTGTAGATTCTACTTTTTTGGTGTTGCCGGCGGTAAGTTGATCAAAAGGATTCGGAAAATGTGTTTTGAGAAAGTTGTTCACATGGAAGTTAGCTGGTTCGATGAAGCTGAACATTCAAGTGGAGCAATTGGAGCAAGGCTCTCTTCTGATGCAGCTGCTGTTCGAGCTTTGGTTGGGGATGCACTTGGTTTGCTGGTTCAAAATGTTGCTACAGTTGTGGGCTGTTTGGTAATTGCGTTTGAAGCAAGCTGGCAGCTTGCTCTTATAGTGCTTGCTTTGGCACCGTTATTAGGACTAAATGGCTACGTGCAATTCAAGTTCATAAGAGGATTCAGCGCAGACGCAAAGAAACTGTACGAGGAAGCAAGTCAAGTCGCAAGTGATGCTGTAGGGAGTATAAGAACTGTTGCCTCTTTCTGTGCTGAAAAGAAGGTGATGGAATTGTACCAGAAAAAGTGTGAAGGACCAATTAAAACAGGCATAAGGCGAGGGATAATAAGTGGAATTGGTTATGGGATATCATTCTTCATGCTTTACACAGTTTATGCATGCAGTTTTTATGCTGGAGCTCGACTTGTAAAGGATGGAAAATCAACATTCTCAGATGTTTTCCGTGTCCTTTTTGCACTCAGCATGGCAGCTATGGGAATCTCTCAATCTGGCTCTTTGGTCCTTGATTCTGCTAAATCAAAAAGTGCTGCCGCTTCTGTATTTGCTATTCTTGATCGAAAGTCACAAATTGACCCAAGTGATGACTCTGGATTGACGTTGGAAGAAGTGCAGGGAGAGATTGAATTTAAAAATGTTAGTTTCAAGTATCCTACCAGACCTGATGTTCAAATATTCAGAGATCTTTGCTTGACTATTCATAGTGGCAAGGTAACTCTTAACTGTACATCAATTCTGATAAATTAG 3201 0.4139 MSEDIDLNGDSERKQDLKRKSKDESAKTIPLYKLFSFADSFDHLLMFVGTVGAITNGISPPLMTLLFGNMINAFGGTKNSNEVVVEVSKVSLEIVYLAVGTCFASLLQLTCWMITGERQAARIRGLYLQTILRQDVTFFDKETRTGEVVGRMSGDTVLIQDAMGEKVGQFLQLLATSVGGFVIAFIRGWLLTVVMLSCIPLIVLAGAMVSLVIAKASSRGQEAYSLAATVVEQTIGSIRTVASFTGEKQAIDKYSQSLIKAYRAGVKEALASGFGFGSLSFVSTCSYGLAIWFGAKMIIEKGYTGGEVVTVMLAVLTGSASLGQASPSLSAFAAGKAAAFKMFETIKRKPEIDAYDTTGRQLEDICGHIELREVYFSYPTRPDELIFNGFSLSVPSGTTTALVGESGSGKSTVVSLIERFYDPQAGEVLIDSINLKEFQLKWIRQKIGLVSQEPVLFTCSIKENIAYGKDDATVEEIRASAELANAAKFINRLPQGLDTMVGEHGTQLSGGQKQRVAIARAILRDPRILLLDEATSSLDVESEKIVQEALDRMMINRTTVIVAHRLSTIRNADSIAVIHQGKIVEKGSHAELTNDLSGVYSQLIRLQEIKGSEQNASYDTDKIESPVLSGRQLSQRSSLRSISQRSAGVGSSGCNSFSESHVPPTISLDPAGRGSQALPATISSPPQVPLSRLAYLNKSEIPVLFIGTLAAVVSGLLIPIIALFVSKMISIFYEPVDELRKDSKLWALLFVAIGAVSFITAPCRFYFFGVAGGKLIKRIRKMCFEKVVHMEVSWFDEAEHSSGAIGARLSSDAAAVRALVGDALGLLVQNVATVVGCLVIAFEASWQLALIVLALAPLLGLNGYVQFKFIRGFSADAKKLYEEASQVASDAVGSIRTVASFCAEKKVMELYQKKCEGPIKTGIRRGIISGIGYGISFFMLYTVYACSFYAGARLVKDGKSTFSDVFRVLFALSMAAMGISQSGSLVLDSAKSKSAAASVFAILDRKSQIDPSDDSGLTLEEVQGEIEFKNVSFKYPTRPDVQIFRDLCLTIHSGKVTLNCTSILIN* 1067
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g2704 1066 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 47 334 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Vra7g2704 1066 Gene3D ABC transporter type 1, transmembrane domain 93 996 IPR036640 GO:0005524|GO:0016021
Vra7g2704 1066 SUPERFAMILY ABC transporter transmembrane region 33 351 IPR036640 GO:0005524|GO:0016021
Vra7g2704 1066 CDD ABC_MTABC3_MDL1_MDL2 369 607 - -
Vra7g2704 1066 CDD ABC_6TM_Pgp_ABCB1_D2_like 694 1009 - -
Vra7g2704 1066 Pfam ABC transporter 388 536 IPR003439 GO:0005524
Vra7g2704 1066 CDD ABC_6TM_Pgp_ABCB1_D1_like 46 330 - -
Vra7g2704 1066 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 369 605 IPR003439 GO:0005524
Vra7g2704 1066 Gene3D - 367 622 IPR027417 -
Vra7g2704 1066 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 705 991 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Vra7g2704 1066 Pfam ABC transporter transmembrane region 704 976 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Vra7g2704 1066 Pfam ABC transporter transmembrane region 46 318 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Vra7g2704 1066 PANTHER ATP-DEPENDENT PERMEASE MDL1, MITOCHONDRIAL 15 1056 - -
Vra7g2704 1066 SMART AAA_5 396 582 IPR003593 -
Vra7g2704 1066 SUPERFAMILY ABC transporter transmembrane region 692 1010 IPR036640 GO:0005524|GO:0016021
Vra7g2704 1066 Gene3D - 1016 1060 IPR027417 -
Vra7g2704 1066 MobiDBLite consensus disorder prediction 1 21 - -
Vra7g2704 1066 ProSitePatterns ABC transporters family signature. 508 522 IPR017871 GO:0005524
Vra7g2704 1066 MobiDBLite consensus disorder prediction 628 660 - -
Vra7g2704 1066 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 362 607 IPR027417 -
Vra7g2704 1066 PANTHER - 15 1056 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra7g2704 Vra-Chr7 47273973 47278294 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra7g2704 96 613 Calmodulin-binding Proteins AT2G36910 39.163 4.23e-104 353
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra7g2704 K05658 - gmx:102660078 1638.24
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra7g2704 7 47273973 47278294 Vra7g2704 7 47273973 47278294 ECH