Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g2693 ATGAATAACCAAGTAACACCAGAAGAAGCAAAAATCGTAGAAGATCAAGCATTTGAGGCTTCTTGCAAGAAAGCTAGAGTGTCTGTAAGAGCACTGTCATCAGAATCTTTGAAGGGAGATGGGTGTCAATGGAGAAAATATGGACAAAAGATATCAAAGGGTAACCCTTGTCCTCGGGCCTATTATCGTTGCAACATGGGAACATCATGTCCAGTTCGCAAACAGGTTCAGAGGTGTGCTGCAGATGAAAGTGTTGTCATTACAACCTACGAAGGGACTCATAATCATTCACTCCCTCCGCCAGCTAGATCCATAGCTTCCACAACATCAGCAGCACTCACCATGTTCCTTTCTGGCTCCACCACTAGTTCAGCTTCTACCTTCTATCCATCTGCATCATCATGTCCCACTGTAACACTTGACTTAACCCAGCCCACTAAGAACTACCTCAAATTCCCTCTTTCACTCAATGCTTACCCTCACAACTATGAAGGATTACCCTCAGACAAACACCTTTCCTTGGTCCATCTTCTTAGTGCTGCCATCACTAGGGATCCTTCTCTTAGGGCAGCATTAGAAGCAGCCGTTTCCTCTATGATTGCAGATTCTCAGAACATCAACAACCACGGCCCTTCTTCTTAG 642 0.4486 MNNQVTPEEAKIVEDQAFEASCKKARVSVRALSSESLKGDGCQWRKYGQKISKGNPCPRAYYRCNMGTSCPVRKQVQRCAADESVVITTYEGTHNHSLPPPARSIASTTSAALTMFLSGSTTSSASTFYPSASSCPTVTLDLTQPTKNYLKFPLSLNAYPHNYEGLPSDKHLSLVHLLSAAITRDPSLRAALEAAVSSMIADSQNINNHGPSS* 214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g2693 213 Gene3D WRKY domain 22 100 IPR036576 GO:0003700|GO:0006355|GO:0043565
Vra7g2693 213 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 10 209 IPR044810 GO:0003700
Vra7g2693 213 ProSiteProfiles WRKY domain profile. 33 99 IPR003657 GO:0003700|GO:0006355|GO:0043565
Vra7g2693 213 SMART WRKY_cls 38 98 IPR003657 GO:0003700|GO:0006355|GO:0043565
Vra7g2693 213 SUPERFAMILY WRKY DNA-binding domain 34 99 IPR036576 GO:0003700|GO:0006355|GO:0043565
Vra7g2693 213 Pfam WRKY DNA -binding domain 40 96 IPR003657 GO:0003700|GO:0006355|GO:0043565
Vra7g2693 213 PANTHER TRANSCRIPTION FACTOR WRKY FAMILY-RELATED 10 209 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra7g2693 Vra-Chr7 47173822 47175966 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra7g2693 10 144 WRKY Transcription Factor Family AT4G04450 56.774 1.40e-55 181
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Vra7g2693 WRKY 8.4e-23 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra7g2693 - - vra:111242081 422.55