Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g2686 ATGAGCCAAAGAAGCAAGAGTCGTGGAGGCATGAAGCTGCTGAAGCAGAGGATGTTTTTGTTTGTGGGCTTGGCGATATTGAAATGGGTAGAAGGCATGGAGGATACTAATGTGACAGATATAGATATGCTATATGTCAACGGAAGAGGTTTCTACAGACCTTTGATGGTTGGGATTACACTTATTAATGGAGCTGCTGCTAAAGGAGCTGTCTGCCTGGATGGATCTTTACCAGGTTACCACTTCCATCGGGGATATGGTTCAGGATCAAACAGTTGGCTTATACAATTGGAGGGAGGAGGCTGGTGTGGAACTATAAAAAATTGTCTTTACAGTAAGAAAACACGTCATGGTTCTTCATTCTTTATGGAAAAACAAATACCATTTATTGGGATATTGAGCAACAAAGCTGAGGAAAATCCAGATTTTTTCAATTGGAATAGAATAAAAATCCGTTATTGTGATGGGGCATCATTTAGTGGGGACAGTCAAAATGCGGGAGCAGGATTATATTTCAGAGGGCAACGCATTTGGCAAGCTGCTATGGAAGATCTAATGTCAAAAGGAATGCGCTATGCCAAACAGGCTCTTCTATCTGGATGTTCTGCAGGAGGTTTAGCTACTATTATACATTGTGATGAATTTCGGGAATTGTTTCCTAGAACCACAAGAGTAAAATGCCTGAGTGATGCTGGATTGTTCCTTGATTCTGTTGATGTGTCTGGCCGTCGCAGCTTGAGGAATTTGTTTGGAAGTGTGGTCACCTTACAGGGAGTGCGAAACAGCCTTCCAAGAAGTTGCACCAGTCGCCTCAATCCAATTTTGTGCTATTTTCCTCAGCACTTAATTGCCGGTGTTAGGACACCACTGTTTCTTCTCAATGCAGCTTATGATACTTGGCAGATTCAAGCCAGTCTTGCTCCACCATCTGCTGACTACCGATGGAACTGGTATGAATGCAGAAAAGATTATGCACGTTGCAGTGCACCACAGATACAGTATCTTCAAGGTTTTCGAAATCAGATGCTTAGATCTACAAGAGCCTTCTCACGGTCTTACAAAAATGGGCTATTCATAAATTCATGTTTCGCACATTGTCAATCAGAAAGACAGGATACGTGGTTTGCTCGTGATTCTCCTCGTATAGGAAACAGGGGAATCGCAGAGTCTGTTGGGAACTGGTTTTTTGACCGAGTTAGTGTCCAGGCTATTGGTTGTCCTTACCCTTGTGACAAAACCTGCCATAATTTGGTTTTTAAGTGA 1263 0.4252 MSQRSKSRGGMKLLKQRMFLFVGLAILKWVEGMEDTNVTDIDMLYVNGRGFYRPLMVGITLINGAAAKGAVCLDGSLPGYHFHRGYGSGSNSWLIQLEGGGWCGTIKNCLYSKKTRHGSSFFMEKQIPFIGILSNKAEENPDFFNWNRIKIRYCDGASFSGDSQNAGAGLYFRGQRIWQAAMEDLMSKGMRYAKQALLSGCSAGGLATIIHCDEFRELFPRTTRVKCLSDAGLFLDSVDVSGRRSLRNLFGSVVTLQGVRNSLPRSCTSRLNPILCYFPQHLIAGVRTPLFLLNAAYDTWQIQASLAPPSADYRWNWYECRKDYARCSAPQIQYLQGFRNQMLRSTRAFSRSYKNGLFINSCFAHCQSERQDTWFARDSPRIGNRGIAESVGNWFFDRVSVQAIGCPYPCDKTCHNLVFK* 421
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g2686 420 PANTHER PECTIN ACETYLESTERASE 19 419 - -
Vra7g2686 420 PANTHER NOTUM-RELATED 19 419 IPR004963 GO:0016787
Vra7g2686 420 Pfam Pectinacetylesterase 55 399 IPR004963 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra7g2686 Vra-Chr7 47111162 47116176 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra7g2686 56 420 Carbohydrate Esterase AT1G57590 68.219 0.0 548
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra7g2686 K19882 - gmx:100791571 827.394
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra7g2686 7 47111162 47116176 Vra7g2686 7 47111162 47116176 ECH
Vra7g2686 7 47111162 47116176 Vra3g0833 3 8469337 8474875 ECH