Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g2679 ATGGGCAGCGGTAATAACATATCATGCCCTGCACCCATGAAGGCCACGTCCAACGGAGTGTTCCAACATGAAAACCCTCTGGATTATGCTCTTCCTCTGTTAATCCTCCAAATATGTTTGGTCGTTACTTTTACCAGATTTCTTGCATTCCTCTTCAGACCCCTCAGACAACCCAGAGTCATTGCTGAAATCATAGGAGGAATACTACTTGGGCCATCTGCAATTGGGCGAAACGAGAAGTTTCTGAATGCGGTTTTTCCAGCGAAAAGCATCACAGTTCTTGACACACTGGCCAACATAGGTCTTTTGTTCTTTTTGTTTCTCGTGGGACATGAGCTTGACATGCGTGCAATTCGACGTACTGGTCACAAGGCCTTAGGCATTGCCCTCTGTGGGATCACTGTGCCTTTTGTTCTTGGGATTGGCACTTCCATTGCTCTTCGAGCCACTGTATCCAAAGATGCTGAGCTATTTCCTTTTCTAGTCTTTATGGGTGTTGCTCTCTCGATCACCGCCTTCCCTGTCCTTGCGAGGATCCTGGCGGAGCTTAAACTCCTAACCACTGATGTTGGTCGCATTGCAATGTCTGCTGCTGCTGTCAATGATGTTGCAGCTTGGATTCTTCTTGCTCTTGCCATAGCCCTTTCTGGTTCTCATGCATCCCCCTTTGTTCCTCTTTGGGTATTGCTCTGTGGTGCTGCTTTTGTCATCTTTGTTGTCTTTGCCATTAGGCCGTTGCTTGTGGCTATGGCTAACCGTTCCCTGGAGGGTGAGCCAGTGAAGGAGGTCTACATATGCATCACATTGACTTTGGTTTTGGCTTGTAGTTTTGTCACTGATACTATTGGAATTCATTCACTCTTTGGGGCTTTTGTGGTTGGTACTGTTATGCCCAAAGAAGGTTCCTTTGCTGGGGTGTTGACTGAAAGGATAGAAGACTTGGTTTCTGGCCTTTTCATGCCACTATATTTTGTGTCAAGTGGCTTGAAGACTAATGTAGCAACAATTAAGGGAGGTCTTTCTTGGGCAATGCTAATGCTTGTTATATTCAACGCTTGCTTTGGGAAGATTATTGGCACTACTGTTGTTTCATTACTGTTTAAGGTGCCTTCCAGAGAAGCGCTGGCTCTTGGATTTCTCATGAACACAAAGGGCTTGGTAGAACTCATTGTTCTCAACATTGGGAGGGACCTTAAGGTGCTGAATGACCAAGCATTTGCCATTTGTGTTGTCATGGCACTGTTCACCACCTTCATCACCACCCCAATAGTCATGGCTATATATAAACCAGCTCGCAGAGGAGCACCTTACAAGCACAAAACAATTCAACGAGATCCCGACACTGAGCTTCGATTGCTAGCTTGCTTCCACAACACCCGTAACATTCCCTCGCTGATCAATCTAATAGAGTGTTCCCGTGGAACTGGAAGGAAAGGAAAGCTTTGTATCTATGCAACGCATTTGATGGAGCTTTCGGAGCGATCTTCGGCAATCACAATGGTTCACAAAGCACACAAAAATGGCATGCCCTTTTGTAACAAGAAGCGGGATGGCAAAGATCAAATGATCATAGCTTTTCAGGCATATGAGAAATTGAGCAGTGTGAGTGTGCGACCCATGACAGTCATTTCTGGTCTCAATAGCATCCACGAGGATATTTGTACTACTGCTCACAGAAAGCGTGCAGCCATGATCATCCTTCCATTCCACAAACACCAACGTGTGGATGGATCGATGGAGTCACTGGGACATTCATTCCAAGAGATGAATCAACTTGTGCTATGTCATGCTCCTTGCTCTGTGGGAATTTTTGTTGATCGAGGTCTTGGAGGGACGAGCCAAGTCCAAGCCAGTGATGTGTCTTATAAGATAGTGGTACCCTTCTTTGGAGGGCGTGATGATCGTGAAGCTCTTTGTTATGGAATGAGAATGGCTGAGCACCCGGGTATTTTTCTCACTGTGCTTAAGTTTGTAAGTCCACCAGGGACATCATTGGCGTTCGGTGTTGAGGTGTCATCAAAGAAATATAGGAAAACAATGGATATGGTTGATGTCAATGATTATGATGATAAAGATGATGAATTGTGGAGTGAGTTTTTAAGTGCATGCAACAACAACACCAAAGAGACAATGAAGTATGAGGAAAAGCTAGTGGAAAGCAAAGCAGATATTGAGACAGCATTGAAGGAAATGCATAGATGCAACCTAATATTGGTTGGTAGAATGCCACCAGTGGCACCTTTGGGTAGCAAGAGTGACTGTCCAGAGCTTGGACCTGTTGGAAGCTTTGTTGCTTCTTCAGATTTTTCCACTGTCACGTCAGTTATGGTAATTCAGCAATACAATCCCTCAACTGACGTTCATCCCTTGGTGATGGAGGAATTTGATTCCCCAGATATATGTCAGATTCACCAGGGAGTTAATAATGCAGTATAA 2436 0.4487 MGSGNNISCPAPMKATSNGVFQHENPLDYALPLLILQICLVVTFTRFLAFLFRPLRQPRVIAEIIGGILLGPSAIGRNEKFLNAVFPAKSITVLDTLANIGLLFFLFLVGHELDMRAIRRTGHKALGIALCGITVPFVLGIGTSIALRATVSKDAELFPFLVFMGVALSITAFPVLARILAELKLLTTDVGRIAMSAAAVNDVAAWILLALAIALSGSHASPFVPLWVLLCGAAFVIFVVFAIRPLLVAMANRSLEGEPVKEVYICITLTLVLACSFVTDTIGIHSLFGAFVVGTVMPKEGSFAGVLTERIEDLVSGLFMPLYFVSSGLKTNVATIKGGLSWAMLMLVIFNACFGKIIGTTVVSLLFKVPSREALALGFLMNTKGLVELIVLNIGRDLKVLNDQAFAICVVMALFTTFITTPIVMAIYKPARRGAPYKHKTIQRDPDTELRLLACFHNTRNIPSLINLIECSRGTGRKGKLCIYATHLMELSERSSAITMVHKAHKNGMPFCNKKRDGKDQMIIAFQAYEKLSSVSVRPMTVISGLNSIHEDICTTAHRKRAAMIILPFHKHQRVDGSMESLGHSFQEMNQLVLCHAPCSVGIFVDRGLGGTSQVQASDVSYKIVVPFFGGRDDREALCYGMRMAEHPGIFLTVLKFVSPPGTSLAFGVEVSSKKYRKTMDMVDVNDYDDKDDELWSEFLSACNNNTKETMKYEEKLVESKADIETALKEMHRCNLILVGRMPPVAPLGSKSDCPELGPVGSFVASSDFSTVTSVMVIQQYNPSTDVHPLVMEEFDSPDICQIHQGVNNAV* 812
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g2679 811 Pfam Sodium/hydrogen exchanger family 39 423 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Vra7g2679 811 Gene3D - 33 435 IPR038770 -
Vra7g2679 811 PANTHER CATION/H+ EXCHANGER 3 6 795 - -
Vra7g2679 811 Gene3D - 494 744 - -
Vra7g2679 811 PANTHER CATION/H + ANTIPORTER 6 795 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra7g2679 Vra-Chr7 47050137 47053639 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra7g2679 8 803 Antiporter Super Family AT3G17630 67.790 0.0 1070
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra7g2679 - - gmx:100780382 1313.9
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra7g2679 7 47050137 47053639 Vra7g2679 7 47050137 47053639 ECH