Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g2667 ATGGCGTTTCAGGATTTTGACCTTATCTCAGAGCGGCGGAGAAACGAGAAGAAGCAGAAGATTAGGAAGAGGATCATGATCGGCGTGGTTTCTTCCATCGTCCTCGTTGGCATGATCGGTGCAGTTCTCTTCGTCGTGGTTAAGAATGATGACACTGGCCGTGGCAATACCAGTGGCAAGAGCACTAACAAGGCACGTACCAGCCATTCACCGCCACACGCTCAAGGTGACTCGCCCAAGGAGCAGGTGGCGCACACGGAGAAGATAGTGAAAATGGTGTGCAGCTCCGCCGATTTCAAGGACAAGTGTGAAGAGCCTCTGAGCAAGGCCATGGATAATGACTCCAAACTCTCGGAACCCAAAGACCTTCTCAAGGCCTACGTTAAGCTTGCAGAGGAAGAGGTTTCCAAGGCCTTCAACAAGACCCTGTCCGTGAAGTTCGACAGTGAACAAGAAAAAGGAGCGTTCGAGGATTGCAAGAAGCTGTTTGAGGATGCCAAGGATGACATCGCAACCACCATCTCTGAACTATCGAAAACCGAGCTCAAGAATATCACTGACAAGAGTCCTGATCTCAACTCCTGGCTCAGTGCTGTCATCTCCTTCCAACAGACCTGCATAGATGGCTTCCCTGAGGGAAACATCAAGACTGAACTTGGAAATCTCATGAACGATTCCAAACAATTCATCAGCAACTCCCTTGCCATTGTCTCTCAGCTCGCATCATCTCTTTCTACATTGGAAACAGCTGCCGCCTCATCACACGGTCGATCCTTGCTATCTCAGTTCTCCAACTCCCCGGCTGCTTCTCTCGACCAAACCGATGGCTTTCCCTCTTGGATCCACAACGATGACCGCAGGATCTTGAAGGCCGTCGATAACAAACCTCCACCTAATGTCACCGTGGCAAAAGATGGAAGTGCAAACTTCAAAACCATCTCCGAAGCTTTGAATGCCGTCCCTGCAAAGTTTGATGGACGGTATGTGATTTACGTCAAAGAGGGAATATACGACGAGCCAGTGAAGATTACAAAGAAAATGCAAAACATAACCATGTACGGTGATGGATCCCAAAAGACAATCGTCACTGGCAACAAAAACTTCAGGGACGGAGTCAGGACTTTCCTCACTGCATCTTTTGTGGTGGAGGGAGACGGATTCATAGGCATGGCAATGGGATTCAGAAACACGGCAGGACCCGATGGGCATCAAGCAGTGGCGGCAAGAGTGCAGGCAGATCGTGCAGTGTTTGCGAACTGTCGTTTCGAGGGGTACCAAGACACTTTATACACCCAAGCACACAGACAATTCTACAGGAGTTGCATCGTGACGGGAACAATCGACTTCATCTTCGGTGATGCGGCTGTGGTGCTCCAGAACTGCATCCTGATAATTAGGAAGCCAAACGACAACCAGCAGAACATGGTGACAGCTCAAGGGAGAGAAGACAAGCAGCAAGCGACTGGAATTGTGCTGCAGAAGTGCACAATCAAAGCCGATGACGCATTGATCCCGGTGAAGGACAAGATAAGAAGCTACCTCGGAAGGCCATGGAAGCAATACTCAAGAACCATTGTGATGGAATCAGAAATAGGTGACGTGATTCACCCAGATGGATGGACAGCTTGGGCAGGTGATTTCGCTCTGAAAACATTGTACTATGCTGAGTATGGGAACACAGGAGCTGGTGCCTCAACCAGCAACAGGGTCAAGTGGCCCGGTTACCAAGTTATCAACAAGGAACAAGCTACACAGTTCACACCTGGTACTTTCTTGAGAGGCACATGGCTTCAGAGCACAGGAGTGCCCTCTACGCAAGGCTTGTACAATTAA 1833 0.4948 MAFQDFDLISERRRNEKKQKIRKRIMIGVVSSIVLVGMIGAVLFVVVKNDDTGRGNTSGKSTNKARTSHSPPHAQGDSPKEQVAHTEKIVKMVCSSADFKDKCEEPLSKAMDNDSKLSEPKDLLKAYVKLAEEEVSKAFNKTLSVKFDSEQEKGAFEDCKKLFEDAKDDIATTISELSKTELKNITDKSPDLNSWLSAVISFQQTCIDGFPEGNIKTELGNLMNDSKQFISNSLAIVSQLASSLSTLETAAASSHGRSLLSQFSNSPAASLDQTDGFPSWIHNDDRRILKAVDNKPPPNVTVAKDGSANFKTISEALNAVPAKFDGRYVIYVKEGIYDEPVKITKKMQNITMYGDGSQKTIVTGNKNFRDGVRTFLTASFVVEGDGFIGMAMGFRNTAGPDGHQAVAARVQADRAVFANCRFEGYQDTLYTQAHRQFYRSCIVTGTIDFIFGDAAVVLQNCILIIRKPNDNQQNMVTAQGREDKQQATGIVLQKCTIKADDALIPVKDKIRSYLGRPWKQYSRTIVMESEIGDVIHPDGWTAWAGDFALKTLYYAEYGNTGAGASTSNRVKWPGYQVINKEQATQFTPGTFLRGTWLQSTGVPSTQGLYN* 611
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g2667 610 CDD PMEI-like_3 93 242 - -
Vra7g2667 610 SMART PMEI_2 85 236 IPR006501 GO:0004857
Vra7g2667 610 Pfam Plant invertase/pectin methylesterase inhibitor 89 236 IPR006501 GO:0004857
Vra7g2667 610 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 88 240 IPR035513 -
Vra7g2667 610 MobiDBLite consensus disorder prediction 53 75 - -
Vra7g2667 610 PANTHER PECTINESTERASE 14 608 - -
Vra7g2667 610 PANTHER PECTINESTERASE 14 608 - -
Vra7g2667 610 SUPERFAMILY Pectin lyase-like 296 607 IPR011050 -
Vra7g2667 610 Pfam Pectinesterase 299 594 IPR000070 GO:0030599|GO:0042545
Vra7g2667 610 ProSitePatterns Pectinesterase signature 2. 443 452 IPR033131 -
Vra7g2667 610 Gene3D Invertase/pectin methylesterase inhibitor family protein 86 243 IPR035513 -
Vra7g2667 610 TIGRFAM PME_inhib: pectinesterase inhibitor domain 83 240 IPR006501 GO:0004857
Vra7g2667 610 MobiDBLite consensus disorder prediction 53 83 - -
Vra7g2667 610 Gene3D - 294 608 IPR012334 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra7g2667 Vra-Chr7 46931350 46933981 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra7g2667 1 610 Carbohydrate Esterase AT2G26450 48.657 0.0 612
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra7g2667 - - vun:114177564 1063.91
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra7g2667 7 46931350 46933981 Vra7g2667 7 46931350 46933981 ECH
Vra7g2667 7 46931350 46933981 Vra5g0216 5 1851393 1853657 PCT