Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g2664 ATGGCATCAAGGAAAGTTTTTAACCAATGCTTGGTTCTGCCAATCTTGCTTATGATTTGCTTTGTTTTGCTGGTTCAATGTGGTAGGCCACATAGCACAGAAGGAGAGGATTTGGTCACAGCAACTTGCAAACACACCCTTCATTTTCAAGTATGCAATTCTTCCCTAAGATCAGTCCCTATCAGTAGCAAGACATCAGATCTCAGAGTGCTTGCTGAGATAGCACTGAATCTCAGCACAGCATATGCTGCAGACACTTTGACCTGTGTTCATGAACTGCAGTCCAATTCTTCCGCTGCCAATAACATCTACGTGTCCCGTTGCTTAAGAGACTGTGAAGAGGAATTCTCGGAAGCCATAGAGAACTTGCAGGACTCAAAAGAAGCACTTGCCAATGGAGATTGTGACAAAGTAGATACACTGGTTTCTGCTGCTATGTCTGATGCTGAGACATGTGAAGATGGCTTCAAGGACTTGCAGCAAAGTGAGGACAATTATTCAACTTCTGCTCTAACTCAACGTAACCGTCACTTCTCTGAACTATGTAGCAATGCTCTTGCTATCACAAAATTACTAGTTTGA 582 0.4296 MASRKVFNQCLVLPILLMICFVLLVQCGRPHSTEGEDLVTATCKHTLHFQVCNSSLRSVPISSKTSDLRVLAEIALNLSTAYAADTLTCVHELQSNSSAANNIYVSRCLRDCEEEFSEAIENLQDSKEALANGDCDKVDTLVSAAMSDAETCEDGFKDLQQSEDNYSTSALTQRNRHFSELCSNALAITKLLV* 194
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g2664 193 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 37 192 IPR035513 -
Vra7g2664 193 PANTHER PECTINESTERASE INHIBITOR-LIKE 19 192 - -
Vra7g2664 193 PANTHER OS05G0360900 PROTEIN 19 192 - -
Vra7g2664 193 TIGRFAM PME_inhib: pectinesterase inhibitor domain 15 192 IPR006501 GO:0004857
Vra7g2664 193 Pfam Plant invertase/pectin methylesterase inhibitor 37 188 IPR006501 GO:0004857
Vra7g2664 193 Gene3D Invertase/pectin methylesterase inhibitor family protein 34 193 IPR035513 -
Vra7g2664 193 Coils Coil 109 129 - -
Vra7g2664 193 CDD PMEI-like_1 38 192 - -
Vra7g2664 193 SMART PMEI_2 34 188 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra7g2664 Vra-Chr7 46903453 46904301 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra7g2664 39 188 Carbohydrate Esterase AT1G53840 28.049 1.22e-10 57.8