Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g2654 ATGGCTAAAGGTGGAAAACTAATGAGGCTGAAATCTGTGCTGAAGAAATGGAACTCATTCGGCAACGGCAAGCAGAGCCGCCACAGCACCAGCGCCGTCGCCGACGACGAGTCCTCCTCCAGATCGGACCTCCACGCCGTCTACGTCGGCAAATCCCGCCGCCTCTACCGGGTATCCTCCGGCGTCCTCGACAACCCCGTCTTCCGGGAACTGGTGGAGAGGTCCCGCGACGACTCCGACCAGCAAGACGACACCATCAATGTCGCATGCGAGGTTGTCCTCTTCGAACACTTGCTGTGGATGCTCGAAAACGCGGACCCACAACCCGAGTCTCTGAACGAACTGGTCGACTTCTATGCCTGCTAA 366 0.5847 MAKGGKLMRLKSVLKKWNSFGNGKQSRHSTSAVADDESSSRSDLHAVYVGKSRRLYRVSSGVLDNPVFRELVERSRDDSDQQDDTINVACEVVLFEHLLWMLENADPQPESLNELVDFYAC* 122
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g2654 121 MobiDBLite consensus disorder prediction 19 42 - -
Vra7g2654 121 MobiDBLite consensus disorder prediction 19 37 - -
Vra7g2654 121 PANTHER SMALL AUXIN-UP RNA-RELATED 4 121 - -
Vra7g2654 121 Pfam Auxin responsive protein 10 102 IPR003676 GO:0009733
Vra7g2654 121 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 4 121 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra7g2654 Vra-Chr7 46779324 46780390 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra7g2654 3 102 Calmodulin-binding Proteins AT4G34750 26.733 1.57e-06 42.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra7g2654 - - ccaj:109809545 205.682
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra7g2654 7 46779324 46780390 Vra7g2654 7 46779324 46780390 ECH