Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g2653 ATGATGGGTCACGTTGAAAGTGGCGCTTCATTTTTTGCTGCAGTTACACTCGCACTCCACCTCGTGACAGCAACCATCCTTTTCCTTCCCCCCTCTTCTTTAAACAGCGCTGTTAGAATCGTTAGGGTTCGTAGGGACGGCACGGGGGATTTCAGGACGGTGACGGAGGCCGTCAACAGTATTCCTTCAGGGAACAAGCGGCGAGTGGTGGTGTGGATCGGAATTGGCGAGTACCGCGAGAAGATAACAGTCGATAGGTCCAAACCTTTCGTCACGTTTTATGGAGAGAGAAATGAGAGCGACACCCACACCATGCCCATCATAACGTACCACGCCACCGCGTTAAGGTATGGGACAGTCGACAGCGCCACCGTCGCTGTCGACTCCGACTACTTCGTCGCTGTCAATGTCGCTTTTGTGAACTCGTCTCCGAGGCCAGATGAAAAGAGTGTTGGAGCACAGGCACTAGCCATGAGGATATCAGGGGACAAGGCTGCGTTCTACAACTGCAAGTTCATGAGCTTTCAGGACACTTTATGTGATGATAAAGGCAGACATTTTTTCAAGGACTGCTATATCCAAGGCTCCTACGATTTCATCTTTGGAAATGGAAAATCCATCTACTTGAGAAGTACCATAGAATCGGTTGCAAAGGGTTTGAGTGTTATAACAGCACAAGGGAGGGAAAGCATTGCAGAAGATACTGGATTCAGTTTCCTTCACTGCAACATTACGGGGAGTGGTAACAGGAACACTTACCTCGGACGTGCCTGGAAGAAGAGCCCTAGAGTGGTATTTGCTTACACTTACATGGGCTCCCTCATCAGTGCCCGGGGATGGTTCACCAATCAACTTCCTCAAAGGAAATCCAACCAGACAATCTACTATGGAGAATATAGGTGCATGGGAGCAGGAGCTGTTTCCTCTGGGCGTGTAAAATTTCGGAAGATACTGTCGTATGAAGAAGCAAAGCCCTTCATGAGCATGGCCTATATTCATGGAGGAAAGTGGGTTGTCCCACCTCCAAAGCTGTGA 1035 0.4918 MMGHVESGASFFAAVTLALHLVTATILFLPPSSLNSAVRIVRVRRDGTGDFRTVTEAVNSIPSGNKRRVVVWIGIGEYREKITVDRSKPFVTFYGERNESDTHTMPIITYHATALRYGTVDSATVAVDSDYFVAVNVAFVNSSPRPDEKSVGAQALAMRISGDKAAFYNCKFMSFQDTLCDDKGRHFFKDCYIQGSYDFIFGNGKSIYLRSTIESVAKGLSVITAQGRESIAEDTGFSFLHCNITGSGNRNTYLGRAWKKSPRVVFAYTYMGSLISARGWFTNQLPQRKSNQTIYYGEYRCMGAGAVSSGRVKFRKILSYEEAKPFMSMAYIHGGKWVVPPPKL* 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g2653 344 PANTHER PECTINESTERASE 33 343 - -
Vra7g2653 344 SUPERFAMILY Pectin lyase-like 40 338 IPR011050 -
Vra7g2653 344 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 33 343 - -
Vra7g2653 344 Pfam Pectinesterase 42 334 IPR000070 GO:0030599|GO:0042545
Vra7g2653 344 Gene3D - 39 341 IPR012334 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra7g2653 Vra-Chr7 46763763 46765382 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra7g2653 36 344 Carbohydrate Esterase AT5G07410 50.809 1.16e-118 345
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra7g2653 K01051 - gmx:100790786 580.096
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra7g2653 7 46763763 46765382 Vra7g2653 7 46763763 46765382 ECH