Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g2652 ATGGATGATGGTGGAGGTTCAAAATTGAGTGGGATTAGGCAGATTGTGAGATTGAAGGAAATGTTTCAGAAGTGGCAAACTGTGACTCTGGGCTCAAAAGATTCAAACCCTGGGGGCATTCCACCAATCATAAACAAAAGACTAACAAATCTTTTGTACTGTGACTCTGATGAGGATAGCTGTTACAGTCCTCAACCACCGCATGATGTTCCCAAAGGTTACTTAGCTGTCTATGTTGGGCCTGAGCTTCGGAGGTTTATCATCCCAACAACCTACCTTAGCCACTCTTTGTTCAAGGTTTTGTTGGAAAAAGCTGCAGAGGAGTTTGGCTTTGATCAGAGTGGTGGACTCACCATTCCATGTGAAATTGAAACCTTCAAATACCTCTTGAACTGCATGGAGAACCACGATGACACCTCCGTCGACTCTTGGTGGAATTGCAGCTGGAAACGCAGCAACTGTGGAAGAATAAATACTTGCTCTCATCTACATAGAAGGAAAACCATGGTTCTAGTTTCTACACTTTCTTCCATTTTGGTTTTGATTTCTTGCATGAAGAATGATATAACTCCCCAACAAAAAAGATTTGTGATGGGTCATTTGTTTGTACAACAGCTGTTAAAAATCTATGTACTTTTCATCCAATGTTCCCCCAATACATGTACTTTCCCAACATATTCAAACAGAACATTTTTGACATTTAATGAAGAATATATCCATTCAGGGATGCGAAAATGTGTTTCTTTTGATTATGAGTTGTGA 762 0.4003 MDDGGGSKLSGIRQIVRLKEMFQKWQTVTLGSKDSNPGGIPPIINKRLTNLLYCDSDEDSCYSPQPPHDVPKGYLAVYVGPELRRFIIPTTYLSHSLFKVLLEKAAEEFGFDQSGGLTIPCEIETFKYLLNCMENHDDTSVDSWWNCSWKRSNCGRINTCSHLHRRKTMVLVSTLSSILVLISCMKNDITPQQKRFVMGHLFVQQLLKIYVLFIQCSPNTCTFPTYSNRTFLTFNEEYIHSGMRKCVSFDYEL* 254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g2652 253 Pfam Auxin responsive protein 61 132 IPR003676 GO:0009733
Vra7g2652 253 PANTHER SMALL AUXIN-UP RNA-RELATED 7 156 - -
Vra7g2652 253 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 7 156 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra7g2652 Vra-Chr7 46757489 46758879 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra7g2652 1 142 Calmodulin-binding Proteins AT3G43120 69.281 1.64e-70 212
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra7g2652 K14488 - gmx:100795275 262.307
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra7g2652 7 46757489 46758879 Vra7g2652 7 46757489 46758879 ECH
Vra7g2652 7 46757489 46758879 Vra5g0230 5 2022050 2023487 PCT