Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g2646 ATGCAAACGCAACCAATTTCCACTCTCGCCTTCACGCTCTTCCTCCTCTTGTTGTCTCCACCACGCGCCGCCGCGGCAAGGCCACCACCAGATCCACTTCGTACATCATGCGCGCAGGCCAGGTACCCCGCTCTATGCGTGCAAACCCTCTCCAACCTTTCCAACACCGCCGCCAAGCCCCTCGACCTGGCCCAGGCCGCCGTCAGAGCTAGTCTGGCCCGTACCCGCGGTCTCTTCGCCTACCTTGGGGCGCTAAAGGCTGCATCGCAGGGTTTCGGACTGAGACAGCGAGTTGCGTTGAGTGACTGCGTTCAGCAGATATCCGACTCGGTGAGAGAGTTGAGCAAGACGCTGAACGAGTTGCAGCACCTCCGCGACGAAACCTTCCAGTGGCAGATGAGCAACGTCCAGACCTGGACAAGCGCCGCCCTCACCAACGGCGACACTTGCATCTCCGGCTTTAACGCTGTCGCCTCCGCCGCCGGGAATATCAAGTTAGAGCTCAAGCAAAGAGTCACCGACGTTTCCATGTTCACCAGCAACGCGCTTTACCTCATCAGCCGCCTCGCCGACAGCGTCACGGGGAAGCCTCGCGCCAATTCCGGGAACTGA 612 0.6046 MQTQPISTLAFTLFLLLLSPPRAAAARPPPDPLRTSCAQARYPALCVQTLSNLSNTAAKPLDLAQAAVRASLARTRGLFAYLGALKAASQGFGLRQRVALSDCVQQISDSVRELSKTLNELQHLRDETFQWQMSNVQTWTSAALTNGDTCISGFNAVASAAGNIKLELKQRVTDVSMFTSNALYLISRLADSVTGKPRANSGN* 204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g2646 203 Pfam Plant invertase/pectin methylesterase inhibitor 33 184 IPR006501 GO:0004857
Vra7g2646 203 PANTHER PLANT INVERTASE/PECTIN METHYLESTERASE INHIBITOR 5 198 - -
Vra7g2646 203 SMART PMEI_2 28 185 IPR006501 GO:0004857
Vra7g2646 203 TIGRFAM PME_inhib: pectinesterase inhibitor domain 8 189 IPR006501 GO:0004857
Vra7g2646 203 CDD PMEI-like_3 35 190 - -
Vra7g2646 203 Gene3D Invertase/pectin methylesterase inhibitor family protein 31 191 IPR035513 -
Vra7g2646 203 PANTHER PECTINESTERASE INHIBITOR-LIKE 5 198 - -
Vra7g2646 203 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 32 189 IPR035513 -
Vra7g2646 203 Coils Coil 104 127 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra7g2646 Vra-Chr7 46713608 46714706 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra7g2646 27 201 Carbohydrate Esterase AT5G53370 28.652 8.21e-16 73.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra7g2646 - - gmx:100810705 247.284
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra7g2646 7 46713608 46714706 Vra7g2646 7 46713608 46714706 ECH