Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vra7g2639 | ATGTCCACCTCCTCGGAGTATTCAGGATTTTCCGGTAACCGCCCGGCCAAGATGACGCCGGAGAAGTCCACGTTCTCTCAGACTTGCAGTCTATTGAGTCAATACCTCAAGGAAAAGGGTACCTTCGGAGACCTTACTCTTGGGATTACACGCACCGTCGAAGCAAACGGTTCTTCTTCTGAAGCATCGTGTCAACCTCCAACGACCATGGAGTTGTTTCCCACCATCTTGACCCAAAGGAACCTTTCTGTTGTGGATTTCTTCTCTTCGGAGCCTGCTTATCCTTACCAATCAGAGCTTCCAACTTTTGTGAATATGTCAAGTGGTTTCAAGTCTGTGGAAAAGGAGCCTAAATCTGCTCCGTTGACAATCTTTTATGCTGGACAAGTGATTGTGTTTGATGATTTTCCCCCTGAAAAAATGGAGGAGATAATGGCACTGGCAAGCAAGGGAATGTCCCAAAGCCCAAACTACCAGGCATATGCTCACTCTAGAAACCAGCAAGGAAATCATACTTCCTTTGTTGCTAATGTCCCTCAACCATCTCCCATACCAACCGTTCGAGATCTTCCAATTGCGAGGAAAGTTTCACTTCATCGGTTCTTCGAGAAGAGAAAACACAGAATTTCTGCCAATGCGCCATATCAAATAAACAATCTCAACCATGTTTCAAATAAGCATGCCGCAGAATCCATTCCATGGCTTGGATTTGGTGTTCCATCAAAATAA | 729 | 0.4513 | MSTSSEYSGFSGNRPAKMTPEKSTFSQTCSLLSQYLKEKGTFGDLTLGITRTVEANGSSSEASCQPPTTMELFPTILTQRNLSVVDFFSSEPAYPYQSELPTFVNMSSGFKSVEKEPKSAPLTIFYAGQVIVFDDFPPEKMEEIMALASKGMSQSPNYQAYAHSRNQQGNHTSFVANVPQPSPIPTVRDLPIARKVSLHRFFEKRKHRISANAPYQINNLNHVSNKHAAESIPWLGFGVPSK* | 243 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vra7g2639 | 242 | Pfam | Jas motif | 191 | 216 | IPR018467 | - | |
Vra7g2639 | 242 | SMART | tify_2 | 115 | 150 | IPR010399 | - | |
Vra7g2639 | 242 | PANTHER | PROTEIN TIFY 4A-RELATED-RELATED | 20 | 237 | IPR040390 | - | |
Vra7g2639 | 242 | MobiDBLite | consensus disorder prediction | 1 | 22 | - | - | |
Vra7g2639 | 242 | Pfam | tify domain | 116 | 149 | IPR010399 | - | |
Vra7g2639 | 242 | PANTHER | PROTEIN TIFY 10A | 20 | 237 | - | - | |
Vra7g2639 | 242 | ProSiteProfiles | Tify domain profile. | 115 | 150 | IPR010399 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Vra7g2639 | Vra-Chr7 | 46622030 | 46624009 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Vra7g2639 | 1 | 239 | Tify Gene Family | AT1G19180 | 41.923 | 3.63e-51 | 165 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | Tify | Vra7g2639 | tify | 1.2e-16 | No_clan |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vra7g2639 | K13464 | - | gmx:100527510 | 311.997 |