Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g2637 ATGGCCGCTGTTCGCCTATTCTTCTTCCTCCTCCTCCTCTCCCTCCTCCCTCCCTCCCATCCTCTCTCGGATAACCAAGCTCTCCTCAACCTAAAAAAATCCTTCTCCGACCCCCAAACCCTCCCCTCCTGGGTCCCCGACCAGAACCCTTGCTCCTCTCGTTGGGTCGGCGTCATCTGCGTCAACAACGTCATCAACAGCCTCCATCTCACCGACCTCTCCCTCTCTGGCACCATAGACATCGAAGCCCTCTCCCAGATCCCCTCTCTCCGCTCCATCAGCTTCAACAACAACAACTTCTCCGGGCCCATTCCCGCCTTCAACAAACTCGGAGTCCTCAAAGCCCTCTACTTGACCAACAATAAGTTCTCCGGCCCCATCCCCTCCGACTTCTTCTCCCAGTTAGCCTCCTTGAAGAAAATATGGCTTTCCAACAACAAATTCTCCGGCCCCGTCCCGCAATCCTTAACCACCCTCCGCTTCCTCTCCGAGCTCCATCTCGAGAACAACGAGTTCTCCGGCCCCGTTCCCGAACTCAAACAGGACATCAAATCACTCGACTTCTCCAACAACAAGCTCCAAGGCCCAATCCCCTCCTCCATGTCGCGCTTCGACGCAAAATCTTTCTCCGGCAACATTGAACTCTGCGGGCAGCCGCTGGATAAACCGTGTGAGTCCGCGGCCAGTGAAGGCCCCGGTTGGGGATTGAAGGTGGTTATTATCATCTTCATTGCCGCTGTTCTCGCCGGCGTTTTCGTCATGGCGCGATCCAAGCGTCAACGCGACGATGACTTTAGCGTGATGAGCAGGGATAACGCGGAGGAGGTGGTGCAGGTGCACGTACCAAGCACCAACCACAGCAGGGGAAACTCCGATGGGAGCAAGAAGGAGTCGACGACGTCGAAGAAAGGGGCGGGGCGGAGTATTGGTGACCTCGTGATGGTGAACGACGAGAGGGGCACGTTTGGGTTGCCTGATCTGATGAAGGCTGCGGCGGAGGTTCTCGGAAACGGTGGGCTGGGTTCGGCGTACAAAGCAGCCATGGCCAGTGGGTTGTCTGTGGTGGTAAAGCGAATGCGGGAGATGAATAAAGTGAGCAGAGACATCTTCGACGCCGAGATGAGACGTTTTGGAAGACTCAGAAACCCTAACATCTTGACGCCTCTCGCTTACCATTACCGCAAGGAGGAGAAGCTGTTCGTCACAGAGTACATGCCCAAAGGAAGCTTGTTATACGTCTTGCACGGTGACAGAGGATCGAGTCATTCGGACCTGAACTGGCCAATCCGTTTGAAAATTGTGAAGGGAATAGCACGAGGGTTAGGGTTTCTGTATAAAGAATTTTCCAGCGAAGACCTGCCACATGGAAACCTGAAATCAAGCAATGTTCTGCTAACTGATAATTACGAAGCTCTCCTCAGCGATTTCGCCTTTCATCCTCTAATGAACCACAGCTACGCCGTACAGACAATGTTTGCATACAAAACTCCAGATTACGTAACATACCAGCGTGTGACACAGAAAACAGACGTCTACTGCCTCGGAATCATCGTTCTTGAGGTGATCACCGGGAAATTCCCTTCTCAGTATCACAGCAATGGCAAGGGTGGCACTGACGTGGTGCACTGGGTGCTAACTGCAATCTCTGACAGAAGAGAGGCGGAGTTGATCGATCCAGAGTTGAAGAGCAGTCACTCTAACTCCCTGAATCAAATGCTACAACTTCTCCAAATAGGGGCTGCTTGCACGGAGAGCAACCCCGACCAACGACTTAACATGAAGGAAGCCATTAGGAGGATAGAGGAGGTTCAGGTTTAA 1818 0.5308 MAAVRLFFFLLLLSLLPPSHPLSDNQALLNLKKSFSDPQTLPSWVPDQNPCSSRWVGVICVNNVINSLHLTDLSLSGTIDIEALSQIPSLRSISFNNNNFSGPIPAFNKLGVLKALYLTNNKFSGPIPSDFFSQLASLKKIWLSNNKFSGPVPQSLTTLRFLSELHLENNEFSGPVPELKQDIKSLDFSNNKLQGPIPSSMSRFDAKSFSGNIELCGQPLDKPCESAASEGPGWGLKVVIIIFIAAVLAGVFVMARSKRQRDDDFSVMSRDNAEEVVQVHVPSTNHSRGNSDGSKKESTTSKKGAGRSIGDLVMVNDERGTFGLPDLMKAAAEVLGNGGLGSAYKAAMASGLSVVVKRMREMNKVSRDIFDAEMRRFGRLRNPNILTPLAYHYRKEEKLFVTEYMPKGSLLYVLHGDRGSSHSDLNWPIRLKIVKGIARGLGFLYKEFSSEDLPHGNLKSSNVLLTDNYEALLSDFAFHPLMNHSYAVQTMFAYKTPDYVTYQRVTQKTDVYCLGIIVLEVITGKFPSQYHSNGKGGTDVVHWVLTAISDRREAELIDPELKSSHSNSLNQMLQLLQIGAACTESNPDQRLNMKEAIRRIEEVQV* 606
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g2637 605 Gene3D Ribonuclease Inhibitor 182 226 IPR032675 -
Vra7g2637 605 SUPERFAMILY L domain-like 21 204 - -
Vra7g2637 605 ProSiteProfiles Protein kinase domain profile. 329 605 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vra7g2637 605 PANTHER LRR RECEPTOR-LIKE KINASE 6 605 - -
Vra7g2637 605 Pfam Leucine rich repeat N-terminal domain 23 60 IPR013210 -
Vra7g2637 605 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 6 605 - -
Vra7g2637 605 Pfam Leucine rich repeat 113 171 IPR001611 GO:0005515
Vra7g2637 605 Gene3D Ribonuclease Inhibitor 23 131 IPR032675 -
Vra7g2637 605 Gene3D Ribonuclease Inhibitor 132 181 IPR032675 -
Vra7g2637 605 Gene3D Phosphorylase Kinase; domain 1 335 405 - -
Vra7g2637 605 SUPERFAMILY Protein kinase-like (PK-like) 333 600 IPR011009 -
Vra7g2637 605 MobiDBLite consensus disorder prediction 279 309 - -
Vra7g2637 605 Gene3D Transferase(Phosphotransferase) domain 1 406 605 - -
Vra7g2637 605 Pfam Protein kinase domain 333 598 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra7g2637 Vra-Chr7 46606033 46608444 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra7g2637 2 605 Receptor kinase-like Gene Family AT3G42880 50.631 0.0 623
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Vra7g2637 Pkinase 1.4e-26 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra7g2637 - - gmx:100816925 962.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra7g2637 7 46606033 46608444 Vra7g2637 7 46606033 46608444 ECH
Vra7g2637 7 46606033 46608444 Vra5g0245 5 2240945 2242954 PCT