Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g2634 ATGGCGAATCATGGTGATTTCACGTATGATGTTTTTATGAGCTTCAAGGGCGAAAACGGGACTCGCTACTCATTCACCGATCATCTCTACCGAGCTTTGCTCCGTCACGGAATCAACGCCTTCAGAGATGATCAGAGTCTCCGAAGCGGGGACGAAATCCGTCCTTCTCTGCTTCAGGCAATCGAAGCTTCCAGAATCTCTTTGGTCGTGCTCTGTCAAAACTATGCATCTTCCTCTTGGTGCCTCGACGAACTGGCCAAGATCCTTCACTGTTACGAAAACAAAGGAAAGCATATCGTTGCAATTTTTTATTTGGTGGAACCTTCCGATGTACGGTACCAGAAAAACAGTTACGCAACTGCCATGAGTAAACATGAAAGCAGATATGGAAAAGACTCGGAGAAGGTTAAAGCATGGCGATCAGCTTTGTCCAGAGTTTGCGACCTAACCGGAATACACTGCAGAAACCATATGTATGAAACTGAGGTTATTGAGAAGATTGTGAAAGACACCTTAGCTAAACTGCCTCCCATGCCTTTACAAATTAAGCACTTAGTTGGACTTGATTCTCGTTTAGAACGGGTGAAATCTCTAATAGATGTTGAATCAAATGATGAAGTTTGTATACTGGGGATCTATGGGGTTGGCGGAATTGGCAAAACCACATTTGCTGTGGATCTGTATAACAAGATCAGGCATCATTTTGAAGCTGCAAGTTTTCTGGCTAATGTCAGAGAAAAAACAAATAAAAGCATTAAGGGCCTGGAAGATCTCCAAAGGACACTTTTGTCTGAGATGGGTGAGGAGACAGAAACCATTATTGGCAGTACATTTAAAGGAAGTTCTGAAATAAAGTGCAGGCTTGGACATAAAAGAGTTCTTCTGGTTGTGGATGATGTTGATTCTGTAAAACAATTGGAAGCATTAGCTGGAGGATATGATTGGTTTGGTCCTGGTAGCAGGATCATTATAACAACAAGAGATAAGGATGTTCTACATAAGCATGATGTTGAAATTAAAGGATATAAGATGGAGGAGCTAAATTATCATGAATCCCTTGAACTCTTTTGTTGGTATGCCTTTAATAGGAGCAGAGCTGCAGAAAACTTTGCTAACATCTCTACTAGTGCAGTAAGATATGCAAAGGGTATTCCGTTGGCATTAAGAGTAATAGGCTCCAATTTGAAGGGTAGAGGTCCTGAAGAATGCGAGACTGAATTACAGAAATATAGAAAGGTTCCAGATTTAGAGATTCAAGGTGTACTGGAAATAAGCTACACAAGCCTATCCAACTTGGACCAGAAAATTTTCCTGGACATTGCATGCTTCTTCAAAGGGGAAAGGTGGGATTATGTCAAAAGGATACTAGATGCTTGTGATTTCAATCCGGATATAAAAGTATTTGTTAGTAAATGTCTCATAACTGTTGATGAAAACGGTTGCTTGGAGATGCATGATCTAATACAAGACATGGGTAGAGAGATTGTTCGGAAGGAATCGCCATCAAACCCTGGTTACCGCAGCAGATTATGGTGTCATAAAGATGTTCATGAAGGAAGTGATACAGTTGAAGGTATAATGCTTTATCCCCCAAAAATAGAAAAAATAGATTATTGGACTGTGACAGCCTTCAAGAAGATGAAGAACCTCAGAATTTTGATTGTTCGCAATGCAATATTTTCGTCTGGTCCTAGTTATCTGCCAAATAGTTTACGGCTAATCGATTGGAAGGGGTACCCATCAAAGTCTTTTCCGCCAGATTTTTATCCCCACAGAATTGTTGACTTCAAGTTACCTCATAGTTCTCTGATATTTAGAAAGCCATTTCAGAGATTTGAGGATCTGACATTCATCAATCTTTCCCATTGTCAACTCATAACTCAAATTCCTGACCTGTCTGGAGCTAAAAGCTTGAAGGTATTTACACTTGATAATTGCTATAGACTGACAAGGTTCGATAAATCCATTGGGTTTATGCCTAACCTTGTCTATTTAAGTGCTTCAGAGTGCACTCTGCTCACAAGTTTTGTGCCAACGATGTATTTGCCCTCTCTCGAAGTGCTTTCATTTAACTTTTGCAGAAGACTTGAACACTTCCCTCATGTAATGCAAAAAATGAATAAGCCATTAAAGATATACATGATGAGTACTGCCATTAAAAAGATTCCGGAATCCATTGGTAACCTTACTGGACTTGAGCATATAGAGATGTCAGTTTGCAAAGAGCTTAAAAATCTGCCAAGTAGCTTCTTTTTGCTTCCAAAACTTGTCACTTTAAAAGTTGATGAATGCTCTCAACTTGGAGAATCATTTCAAAGGTTCCGAGAGAGCCGCCATTCAGTGGCAAATGGCAGTTCAAATTTAGTGACACTTCATTTTTGTGAGACTAATCCATCATATGAAGATCTTTGTGCCATTCTTGAAATTTTTCCAAAATTAGAAGACTTTAATGTATCACACAACGGATTTGTAGCCCTACCAAACATCATCGGAGGATCTTCTCACTTGAAAAGCCTTAATGTTAGTTTCTGCAGGAATCTTAAGGAAATTCCAGAACTTCCCTTAAGTATTCAGAAAGTAGATGCAAGATACTGTCAGTCCTTAACTTCAGAGGCATCAAGCATGCTATGGTCTAAGGTCTCAGAAGAGATCCCAAGAATACAAGTTGTAATGCCGATGCTGAAAAGAGAAATACCTGAATGGTTTGACTGCATAGGCACTAAAGAGATTCCACATTTCTGGGCTCGCAGAAAGTTTCCTGTTGTTGCTTTAGCATTCGTTTTCCAGGAATCGAGAAAGAAACTGTCTGATCTTGAACATGCTTTCCAGTCAGCTGTAGAATCGTTCACTGGATTTATGAACTGGCACACTGTAAGCCTCCACTTGTTTATTGACGGACAAGAAATATGTGGTAGAGATTACCACTGTTTCAACGTTGGAGAAGATCATGTGTTATTTTGTGATCTCCGAGTCTTGTTCAGGGATGAAGAGTGGCAGGGCCTTGAAGCAAGTCTTGGAGATGATTGGAAGGCCATTCAGGTTCAATACGAATCAGACCTGATTCTGAGTCATTGGGGAGTTAATGTGTACGAGCAAGAAACAAACATGGATGATATCCAGTTCAAATTTCCCACTCCCAGCTCCACGAGGAACTTAATTCCATCATCACTTTTGGTTCCAAAAGGTTGTCCAAAGCAGAAAATGAAACATATGCTGGAAAGTTTTGATCCACGAGACATGTTTACCAAGAATCTGTCTCTAATAGAGTCAGAAGAAGGTCCAAGCAGGGCTGCAAAAGTACTTTTGAGGACCTGGAGGAATGCTAAGGCTGAGATTACCGAGGAAGCTTCAGTTTCAGTCTACGGGGCAAGTTTAAAGCAAGAACACGAAGAATGTGTTGACGATGTGGTACAGGTTTTAGAGATGATAAAGGAGAATGTACTCAAACATTTTTCTGATTCAAACCCTGAAGAAATGCAATCGCTTGGTAGATTTGTAGAAAGATTATTGAGGGCACGGGTAGAAGTAATGAAGGAAGACGCGTTGGAGCTGGGTATGCCTATTCTTCTAGAGTACACTGACGTAGGAGGATCTAAATATCGACGCTTTTGGGGAGTGTTGCAATTAGAAGTGGGAGATCCATTTTACAAAGCAGTGTTGAGGAAGTATATCCAACTTTCATTGGAATTTTCTACAAGCAACAAAGCCGCCTCCAGCTCAGGTTCGTGGTTTGAAAACTTGAGGATAAGCATTGTTTTATTGAAATGCTTGGATACAGCCATGGAGGAAGCTTCGGGCTTTGGCTATGAGGAATCCTTGGAGGAAGGATACTACGATCCTGAATTGCAAGAATTAATGATGAGGATTGAGCAAGATGGTATGGGGTTTAATAAATCTTACGGCAAAATGAAGGCATCTATTGTTCGAACCGATGAATCGGTTTCTCCAAAGTATTTATTTGAGACATTAATCTTCAGAAGACTAATAGCTTTGGGAAAATTGTCAATGTTTGGATCTGCAACTAAGTTCAAGATAACACCGTATGGGAATATAAGGGTTGAGGACGATCCTTTTCGCATTCCGAAGACGTGCTTCTGGAGTTTGATCTTGGTTCTTTATCTACTTTTCTTCATAATCATACGGTTATTTTGTTTGGTAGGATATGTGGGGCTTTTGATATGTAGGATACCAGTAATAGGGAAGATATTAGTGTGTGGTTGGTGGCTTGTCATGCAAATTCTTATGTCTTGTAAATACTTGTATCATGGAATGGGTAAGATTATGAAAATAAAGAAGAAGGACTTGTAA 4308 0.3997 MANHGDFTYDVFMSFKGENGTRYSFTDHLYRALLRHGINAFRDDQSLRSGDEIRPSLLQAIEASRISLVVLCQNYASSSWCLDELAKILHCYENKGKHIVAIFYLVEPSDVRYQKNSYATAMSKHESRYGKDSEKVKAWRSALSRVCDLTGIHCRNHMYETEVIEKIVKDTLAKLPPMPLQIKHLVGLDSRLERVKSLIDVESNDEVCILGIYGVGGIGKTTFAVDLYNKIRHHFEAASFLANVREKTNKSIKGLEDLQRTLLSEMGEETETIIGSTFKGSSEIKCRLGHKRVLLVVDDVDSVKQLEALAGGYDWFGPGSRIIITTRDKDVLHKHDVEIKGYKMEELNYHESLELFCWYAFNRSRAAENFANISTSAVRYAKGIPLALRVIGSNLKGRGPEECETELQKYRKVPDLEIQGVLEISYTSLSNLDQKIFLDIACFFKGERWDYVKRILDACDFNPDIKVFVSKCLITVDENGCLEMHDLIQDMGREIVRKESPSNPGYRSRLWCHKDVHEGSDTVEGIMLYPPKIEKIDYWTVTAFKKMKNLRILIVRNAIFSSGPSYLPNSLRLIDWKGYPSKSFPPDFYPHRIVDFKLPHSSLIFRKPFQRFEDLTFINLSHCQLITQIPDLSGAKSLKVFTLDNCYRLTRFDKSIGFMPNLVYLSASECTLLTSFVPTMYLPSLEVLSFNFCRRLEHFPHVMQKMNKPLKIYMMSTAIKKIPESIGNLTGLEHIEMSVCKELKNLPSSFFLLPKLVTLKVDECSQLGESFQRFRESRHSVANGSSNLVTLHFCETNPSYEDLCAILEIFPKLEDFNVSHNGFVALPNIIGGSSHLKSLNVSFCRNLKEIPELPLSIQKVDARYCQSLTSEASSMLWSKVSEEIPRIQVVMPMLKREIPEWFDCIGTKEIPHFWARRKFPVVALAFVFQESRKKLSDLEHAFQSAVESFTGFMNWHTVSLHLFIDGQEICGRDYHCFNVGEDHVLFCDLRVLFRDEEWQGLEASLGDDWKAIQVQYESDLILSHWGVNVYEQETNMDDIQFKFPTPSSTRNLIPSSLLVPKGCPKQKMKHMLESFDPRDMFTKNLSLIESEEGPSRAAKVLLRTWRNAKAEITEEASVSVYGASLKQEHEECVDDVVQVLEMIKENVLKHFSDSNPEEMQSLGRFVERLLRARVEVMKEDALELGMPILLEYTDVGGSKYRRFWGVLQLEVGDPFYKAVLRKYIQLSLEFSTSNKAASSSGSWFENLRISIVLLKCLDTAMEEASGFGYEESLEEGYYDPELQELMMRIEQDGMGFNKSYGKMKASIVRTDESVSPKYLFETLIFRRLIALGKLSMFGSATKFKITPYGNIRVEDDPFRIPKTCFWSLILVLYLLFFIIIRLFCLVGYVGLLICRIPVIGKILVCGWWLVMQILMSCKYLYHGMGKIMKIKKKDL* 1436
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g2634 1435 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 15 1114 - -
Vra7g2634 1435 Gene3D - 346 430 IPR042197 -
Vra7g2634 1435 SMART till_3 8 149 IPR000157 GO:0007165
Vra7g2634 1435 SUPERFAMILY L domain-like 500 874 - -
Vra7g2634 1435 Gene3D - 7 174 IPR035897 -
Vra7g2634 1435 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 178 440 IPR027417 -
Vra7g2634 1435 ProSiteProfiles TIR domain profile. 7 175 IPR000157 GO:0007165
Vra7g2634 1435 SUPERFAMILY Toll/Interleukin receptor TIR domain 4 151 IPR035897 -
Vra7g2634 1435 Pfam NB-ARC domain 191 398 IPR002182 GO:0043531
Vra7g2634 1435 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 15 1114 IPR044974 GO:0006952
Vra7g2634 1435 Gene3D - 175 341 IPR027417 -
Vra7g2634 1435 PRINTS Disease resistance protein signature 209 224 - -
Vra7g2634 1435 PRINTS Disease resistance protein signature 287 301 - -
Vra7g2634 1435 PRINTS Disease resistance protein signature 381 395 - -
Vra7g2634 1435 PRINTS Disease resistance protein signature 680 696 - -
Vra7g2634 1435 Pfam TIR domain 9 182 IPR000157 GO:0007165
Vra7g2634 1435 Gene3D Ribonuclease Inhibitor 532 712 IPR032675 -
Vra7g2634 1435 Gene3D Ribonuclease Inhibitor 713 888 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra7g2634 Vra-Chr7 46586663 46592593 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra7g2634 9 777 WRKY Transcription Factor Family AT4G12020 30.353 1.98e-85 307
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra7g2634 - - mtr:MTR_4g023040 1801.18