Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g2628 ATGAAATGTTGCCTTATAAATGAAAGCGGAGAAGAGGCATTGCATTCTAATGGTGTGATTAAGCACAAGGAACAGCAAGTCATGGAATTATTTTCAGTTTTTCTTTCTTCCATCTTCTCTCTGTCACTTCTCTTCGGCCTCCAACTCACGCCGCCGGTGTCTGCCAGGAAGAGTTACATAGTACACATGAAAGAGCGTCACGATCCTAGCGTGCACCCCACGCACCTTGACTGGTACACTGCCACTCTTTCTTCTTCTCCAGACTCTCTCCTTTATGCCTACACCTCTGTTTACAATGGCTTCGCTGCCACGCTTGACCCTCAACAACTCCACGCGCTCAGAACTTCCGACTCAGTTTTGGGTGTATACGAAGACACGCTTTACAAGCTACACACCACACGCACCCCTGAGTTCCTTGGTCTCCAAGCCCACTCTGAGTTTTGGGAAGACCTTGACCACGCATCACACAACGTCGTTATTGGGGTCCTTGACACTGGCGTCTGGCCAGAATCCCAAAGCTTTGATGATTCCCAAATGCCCCAAACCCCCACGCGCTGGCGGGGCACCTGTGACTCCGCACCTGATTTCGACCCTTCTCTTTGTAACAACAAACTTATTGGCGCTCGCAGTTTCTCCAAGGGCTATCTCATGGCTTCTGGTAACTCCAGAAAGCCCAGAGACATTGCTTCGCCGCGTGACCGTGACGGCCACGGTACGCACACAGCCTCTACGGCAGCAGGCTCCGTCGTCTCCAACGCCACGCTTCTTGGTTACGCCACCGGCACCGCAAGAGGGATGGCGCCGCAGGCGCGCGTGGCGGCTTACAAAGTCTGCTGGACTGACGGCTGTTTCGCCTCCGACATTCTTGCCGGAATGGATCAGGCAATCCAGGATGGAGTCGATGTCCTCTCGCTCTCCCTCGGCGGCTCCTCCTCCGTTCCATACTACTTCGACACCATTGCTATTGGAGCCTTCGCTGCAGTGGAGAGAGGAATATTCGTTTCGTGTTCCGCAGGGAATACTGGACCCCGAAGCGGTTCTGTTGCTAATGTCGCTCCGTGGATCATGACCGTCGGAGCCGGCACACTGGACCGTGATTTTCCGGCGTACGCTACTCTTGGGAACGGGAAACGCTTTGCCGGCGTTTCGCTCTACAGTGGTGAAGGTATGGGAGACGAACCGGTTGGATTGGTTTATTTCAGCGACCGGTCGAACTCTTCGAGCAGCATTTGCATGCCTGGCTCACTGAACCCGGAGACAGTTCGCGGGAAGGTGGTGGTTTGTGACAGAGGGCTTAACGCGCGCGTAGAGAAGGGCACAGTTGTGCGCGACGCGGGTGGGGTGGGGATGATACTCGCGAACACAGCGATGAGCGGCGAGGGACTGGTGGCGGACAGTCACCTTGTGGCCGCCGTGGCAGTGGGGGAAAACGCGGGTGATGAGATTAGAGAGTATGCGTCGATGGATCCTAATCCAACCGCTGTTCTGAGCTTCGGTGGGACCGTGTTGAACGTGAGGCCGTCGCCTGTGGTGGCGGCGTTTAGCTCTCGCGGGCCCAATGGTGTGACGGCCCAGATACTTAAACCGGATATTATTGGGCCTGGAGTGAACATCTTAGCAGGTTGGTCCGGTGCAGTTGGGCCATCTGGGTCCGAAGACACTCGCAAAACGCGTTTCAACATCATGTCTGGTACTTCCATGTCTTGTCCTCACATAAGTGGGTTGGCTGCGCTGTTGAAAGCAGCGCATCCAGATTGGAGTCCAAGTGCGATCAAATCTGCCCTCATGACAACGGCTTATACCCACGACAACACAGAGTCTCCGCTTCGTGATGCAACAGGAGAAGAAGCCCTCTCCACACCATGGGCCTATGGGGCCGGTCATGTGAACCCACAAAAGGCCCTATCTCCTGGCCTTGTTTATGATGCCTCCACACAGGACTACATTGCCTTTTTGTGCTCCCTCAACTACACCAACGACCATCTCAGACTCGTGGCTAAGCATCCCGACGTCAATTGTTCCACAAAATTTGCTGACCCGGGTGACCTCAATTATCCATCTTTCTCGGTCGTTTTTGGAACCAATAAGGTTGTACGGTACACGCGCACGTTGACCAACGTTGGGGAGGCGGCATCTGTGTATGACGTGGCGGTTAGCGCGCCGTCCTCTGTGGAGATAACGGTGAATCCTAACAGGGTTTCGTTTACAGAAGTGGGGGATCGACAAACGTACACGGTGACCTTTGTGTCGAATAGGAGTGTTAATGATTCGGTTGCTTCTGAATTTGGTAGCATCATGTGGAGCAATGAAGAACATAAAGTTAGGAGCCCGGTTGCTTTCACATGGACATATTTTTGA 2358 0.539 MKCCLINESGEEALHSNGVIKHKEQQVMELFSVFLSSIFSLSLLFGLQLTPPVSARKSYIVHMKERHDPSVHPTHLDWYTATLSSSPDSLLYAYTSVYNGFAATLDPQQLHALRTSDSVLGVYEDTLYKLHTTRTPEFLGLQAHSEFWEDLDHASHNVVIGVLDTGVWPESQSFDDSQMPQTPTRWRGTCDSAPDFDPSLCNNKLIGARSFSKGYLMASGNSRKPRDIASPRDRDGHGTHTASTAAGSVVSNATLLGYATGTARGMAPQARVAAYKVCWTDGCFASDILAGMDQAIQDGVDVLSLSLGGSSSVPYYFDTIAIGAFAAVERGIFVSCSAGNTGPRSGSVANVAPWIMTVGAGTLDRDFPAYATLGNGKRFAGVSLYSGEGMGDEPVGLVYFSDRSNSSSSICMPGSLNPETVRGKVVVCDRGLNARVEKGTVVRDAGGVGMILANTAMSGEGLVADSHLVAAVAVGENAGDEIREYASMDPNPTAVLSFGGTVLNVRPSPVVAAFSSRGPNGVTAQILKPDIIGPGVNILAGWSGAVGPSGSEDTRKTRFNIMSGTSMSCPHISGLAALLKAAHPDWSPSAIKSALMTTAYTHDNTESPLRDATGEEALSTPWAYGAGHVNPQKALSPGLVYDASTQDYIAFLCSLNYTNDHLRLVAKHPDVNCSTKFADPGDLNYPSFSVVFGTNKVVRYTRTLTNVGEAASVYDVAVSAPSSVEITVNPNRVSFTEVGDRQTYTVTFVSNRSVNDSVASEFGSIMWSNEEHKVRSPVAFTWTYF* 786
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g2628 785 Pfam Fibronectin type-III domain 682 779 IPR041469 -
Vra7g2628 785 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 48 131 IPR037045 -
Vra7g2628 785 Pfam Peptidase inhibitor I9 58 131 IPR010259 -
Vra7g2628 785 Gene3D - 652 782 - -
Vra7g2628 785 PANTHER CUCUMISIN-RELATED 48 782 - -
Vra7g2628 785 SUPERFAMILY Subtilisin-like 130 639 IPR036852 GO:0004252|GO:0006508
Vra7g2628 785 CDD PA_subtilisin_like 370 494 - -
Vra7g2628 785 CDD Peptidases_S8_3 128 600 IPR034197 -
Vra7g2628 785 Pfam Subtilase family 156 604 IPR000209 GO:0006508|GO:0008236
Vra7g2628 785 Pfam PA domain 411 482 IPR003137 -
Vra7g2628 785 Gene3D Peptidase S8/S53 domain 157 648 IPR036852 GO:0004252|GO:0006508
Vra7g2628 785 MobiDBLite consensus disorder prediction 218 243 - -
Vra7g2628 785 Gene3D - 364 503 - -
Vra7g2628 785 SUPERFAMILY Protease propeptides/inhibitors 56 129 - -
Vra7g2628 785 ProSitePatterns Serine proteases, subtilase family, serine active site. 564 574 IPR023828 -
Vra7g2628 785 PRINTS Subtilisin serine protease family (S8) signature 155 174 IPR015500 -
Vra7g2628 785 PRINTS Subtilisin serine protease family (S8) signature 233 246 IPR015500 -
Vra7g2628 785 PRINTS Subtilisin serine protease family (S8) signature 563 579 IPR015500 -
Vra7g2628 785 ProSiteProfiles Serine proteases, subtilase domain profile. 127 635 - -
Vra7g2628 785 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 48 782 IPR045051 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra7g2628 Vra-Chr7 46529457 46533134 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra7g2628 54 785 Subtilisin-like Serine Gene Family AT2G05920 66.350 0.0 984
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra7g2628 - - gmx:100786523 1325.07
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra7g2628 7 46529457 46533134 Vra7g2628 7 46529457 46533134 ECH
Vra7g2628 7 46529457 46533134 Vra5g0256 5 2336560 2339413 PCT