Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g2620 ATGCATTCTGTTTCTTCCACAATTCACCTTTCATTCTTCCACAATTCTGTTTCTTCCAAATGCCCAAGAACTGCGTCATCTCTCTCCATGGATTCTGATTTCTTGAAGAAAGATGCTTCGCTGCAGCTTTTGAGTCTAAAGCCCCATCTCCCCAGACAAAAAACTGCGACTTTCTGCCATCTCAACTTTGGGCGGAAGCAACCTTCGCCAGAAGAATTGGGTCCACATGAAAGCTTGGAGTTTAGGAATTTCATTGTAAGAGAGGCCTTTCTTAATGAAGAGTTTTGGATAGCAGCTGCGCTAAGGGCAGAACATAAGATGGAAAATAAATCAAGATATAACCACTATGAGAAGAGGCTACACACTATCGAGGAATATGATAAGATAAAGAAGCAGTGCAGAGAGCCACAACCCGGCCATAGCTCCACATGCATCATCGCGGTGAAAAAGCAAGTAAAGGATGTAACACGAATAGTCCTACGAAGTGTCGTAGGAACCCTTGATTTGAATATCAGATGTTTGCAGTTTGGGCAGAGCTATCCTAGAGAAAGGGTGTATGCTACTGGTTTTCAAGTCAAGGAAAGATCATCAAGCAGATACGGTTATATTGCAAACGTGTGTGTTACTAAATCATATCGCCGCAAGGGTATTGCAAGCACCATGTTGTCTTTTGCTGTGAAATATGCAAAATCTAGAGGTGTGAATAGTGTTTATGCGCATGTAAATAGAAATGATGGCCCTGCATTGGCATTGTTCCAAAAGTTGGGGTTTGAGGTACTTGACATTGCAAACCCCTTGTTGATTACGTGTAATTTGTACTTGCTTGGCTTACAGATATAA 840 0.4179 MHSVSSTIHLSFFHNSVSSKCPRTASSLSMDSDFLKKDASLQLLSLKPHLPRQKTATFCHLNFGRKQPSPEELGPHESLEFRNFIVREAFLNEEFWIAAALRAEHKMENKSRYNHYEKRLHTIEEYDKIKKQCREPQPGHSSTCIIAVKKQVKDVTRIVLRSVVGTLDLNIRCLQFGQSYPRERVYATGFQVKERSSSRYGYIANVCVTKSYRRKGIASTMLSFAVKYAKSRGVNSVYAHVNRNDGPALALFQKLGFEVLDIANPLLITCNLYLLGLQI* 280
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g2620 279 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 113 279 IPR000182 GO:0016407
Vra7g2620 279 PANTHER ACYL-COA N-ACYLTRANSFERASES (NAT) SUPERFAMILY PROTEIN 29 277 - -
Vra7g2620 279 PANTHER ACYL-COA N-ACYLTRANSFERASES (NAT) SUPERFAMILY PROTEIN 29 277 - -
Vra7g2620 279 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 197 261 IPR016181 -
Vra7g2620 279 Pfam Acetyltransferase (GNAT) family 194 257 IPR000182 GO:0016407
Vra7g2620 279 CDD NAT_SF 192 240 - -
Vra7g2620 279 Gene3D - 84 264 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra7g2620 Vra-Chr7 46444737 46446657 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Vra7g2620 Acetyltransf_1 4.9e-12 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra7g2620 - - vra:106766506 561.607
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra7g2620 7 46444737 46446657 Vra5g0261 5 2410678 2413684 PCT