Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g2608 ATGGTGAGGGTTAGTGTGTTGAACGATGCTCTCAAGAGCATGTACAATGCTGAGAAAAGGGGGAAGCGCCAAGTCATGATTAGGCCATCCTCCAAGGTCATTATCAAATTTCTTTTGGTGATGCAGAAGCACGGTTACATTGGAGAGTTTGAGCGAGTTGATGACCACAGGGCTGGTAAAATCGTGGTTGAATTGAATGGTAGACTGAACAAATGTGGGGTTATTAGCCCCCGTTTTGATGTTGGTGTCAAAGAGATAGAACCTTGGACTGCTAGGCTTCTCCCCTCAAGACAGTTTGGTTACATTGTATTGACTACCTCTGCTGGCATCATGGATCACGAAGAGGCCAGGAGAAAGAATGTTGGTGGTAAGGTCCTAGGTTTCTTCTACTAG 393 0.4555 MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFERVDDHRAGKIVVELNGRLNKCGVISPRFDVGVKEIEPWTARLLPSRQFGYIVLTTSAGIMDHEEARRKNVGGKVLGFFY* 131
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g2608 130 ProSitePatterns Ribosomal protein S8 signature. 100 117 IPR000630 GO:0003735|GO:0005840|GO:0006412
Vra7g2608 130 Gene3D - 1 69 - -
Vra7g2608 130 Hamap 30S ribosomal protein S8 [rpsH]. 2 130 IPR000630 GO:0003735|GO:0005840|GO:0006412
Vra7g2608 130 PANTHER OS02G0478600 PROTEIN 1 130 - -
Vra7g2608 130 Gene3D - 70 130 - -
Vra7g2608 130 SUPERFAMILY Ribosomal protein S8 4 130 IPR035987 GO:0003735|GO:0005840|GO:0006412
Vra7g2608 130 Pfam Ribosomal protein S8 7 130 IPR000630 GO:0003735|GO:0005840|GO:0006412
Vra7g2608 130 PANTHER 40S RIBOSOMAL PROTEIN S15A 1 130 IPR000630 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra7g2608 Vra-Chr7 46344367 46345700 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra7g2608 1 130 Cytoplasmic Ribosomal Protein Gene Family AT5G59850 96.154 4.44e-91 258
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra7g2608 K02957 - mus:103999910 258.455